CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	80.51	82.89
HORVU2Hr1G094960.4	Barley	cytosol	51.76	81.82
TraesCS2A01G400100.1	Wheat	cytosol	77.32	81.21
TraesCS2D01G397700.1	Wheat	cytosol	77.0	80.87
Zm00001d026078_P001	Maize	cytosol	74.12	80.28
TraesCS2B01G418200.2	Wheat	cytosol	76.36	78.88
KXG31015	Sorghum	cytosol	70.29	73.09
GSMUA_Achr11P...	Banana	cytosol	58.79	64.34
GSMUA_Achr1P03900_001	Banana	cytosol	59.74	64.04
GSMUA_Achr4P27200_001	Banana	cytosol	58.47	63.76
GSMUA_Achr5P03300_001	Banana	cytosol	58.47	62.89
GSMUA_Achr4P24870_001	Banana	cytosol	58.79	60.73
KRH65151	Soybean	cytosol	53.67	59.79
EER95641	Sorghum	cytosol	55.91	59.52
EER94629	Sorghum	plasma membrane	56.87	59.14
KRH48244	Soybean	cytosol	53.04	59.07
VIT_15s0048g01930.t01	Wine grape	cytosol	54.31	58.82
EER99217	Sorghum	cytosol	55.91	58.53
CDY42484	Canola	cytosol	51.76	56.84
AT3G61060.2	Thale cress	cytosol	52.4	56.36
CDX89095	Canola	cytosol	50.8	55.59
Bra014456.1-P	Field mustard	cytosol	50.48	55.24
Solyc08g080360.2.1	Tomato	plastid	50.8	55.02
VIT_02s0025g04380.t01	Wine grape	cytosol	53.99	54.69
PGSC0003DMT400058590	Potato	plastid	50.48	54.67
VIT_16s0100g00520.t01	Wine grape	cytosol	48.56	54.48
CDY57080	Canola	cytosol	48.56	53.9
KRH03980	Soybean	cytosol, plastid	48.56	53.15
PGSC0003DMT400010881	Potato	plastid	48.88	52.94
Bra019781.1-P	Field mustard	cytosol	48.24	52.61
CDY16361	Canola	extracellular	32.27	52.6
Solyc10g017960.1.1	Tomato	cytosol	48.88	52.4
CDX98047	Canola	cytosol	47.92	52.26
Solyc12g056410.1.1	Tomato	cytosol, plastid	48.24	52.25
KRG91447	Soybean	cytosol, plastid	48.88	52.22
Solyc01g091700.2.1	Tomato	cytosol	47.6	51.92
PGSC0003DMT400026564	Potato	cytosol	48.88	51.86
CDY49201	Canola	cytosol	47.92	51.72
CDY47354	Canola	cytosol	47.92	51.72
Bra027618.1-P	Field mustard	cytosol	47.92	51.72
KRH35368	Soybean	cytosol	49.2	51.68
KRH09123	Soybean	cytosol	46.96	50.87
PGSC0003DMT400071397	Potato	cytosol	46.65	50.69
Bra027000.1-P	Field mustard	cytosol	46.96	50.69
CDY45973	Canola	cytosol	46.96	50.69
CDY63226	Canola	plastid	46.96	50.69
KRH38594	Soybean	cytosol	46.65	50.52
AT1G63090.1	Thale cress	cytosol	46.33	50.17
Solyc03g026160.2.1	Tomato	cytosol, extracellular	24.28	50.0
CDY38901	Canola	cytosol	43.77	49.28
PGSC0003DMT400037131	Potato	cytosol	45.37	47.97
AT5G52120.1	Thale cress	cytosol	44.41	47.77
CDY32595	Canola	cytosol	44.09	47.75
Bra029137.1-P	Field mustard	cytosol	44.09	47.59
AT1G12710.2	Thale cress	cytosol	48.88	45.95
KRH57251	Soybean	plastid	48.56	44.57
EES05996	Sorghum	cytosol	21.73	24.37
EES05998	Sorghum	cytosol	21.09	23.74
KXG31332	Sorghum	cytosol	22.68	23.28
KXG31333	Sorghum	cytosol	22.36	23.03
OQU85929	Sorghum	cytosol	20.13	22.11
KXG28410	Sorghum	cytosol	18.85	21.85
OQU85933	Sorghum	cytosol, mitochondrion	15.65	19.07
EES05994	Sorghum	cytosol	20.45	18.93
OQU92610	Sorghum	mitochondrion	19.17	16.09
OQU85932	Sorghum	mitochondrion	22.68	12.66

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	EntrezGene:8060405	UniProt:C5YE44	EnsemblPlants:EES11284	ProteinID:EES11284
ProteinID:EES11284.1	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	PFAM:PF14299
InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF4	EnsemblPlantsGene:SORBI_3006G184300	SUPFAM:SSF81383	unigene:Sbi.20132
UniParc:UPI0001A86D4D	RefSeq:XP_002446956.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:53935224..53938399

Molecular Weight (calculated)

34676.9 Da

IEP (calculated)

5.381

GRAVY (calculated)

-0.241

Length

313 amino acids

Sequence
(BLAST)

001: MGVGASTSVV APEGYGRGRG WGQTSLGDMP ESCVAAVLLY LDPAEICQVA CLNRAFRGAA SADCIWAAKL PANYRYLAAL AAAADDDDDC GCGGAAEGDD
101: GRCCSSAAIK KEIYARLCRP TPFDGGTKEF WIEKNKGGFC MSISSKAMSI TGRDDRRYWS HLSTEESRFH SVAYLQQIWW LEVGGEIDFC FPAGSYSLFF
201: RLHLGRPHKR MGRRGHGSEN IHGWDIRPTR FQLSTSDDQH TVSESYLINP GRWILYHVGD FVISSSDEVT ELKFSMMQID CTHTKGGLCV DSVYIYPKDL
301: EFEEDCVFCQ QIL

Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.