Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plastid 1
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G400100.1 Wheat cytosol 82.24 83.89
TraesCS2D01G397700.1 Wheat cytosol 81.58 83.22
TraesCS2B01G418200.2 Wheat cytosol 81.25 81.52
HORVU2Hr1G094960.4 Barley cytosol 52.96 81.31
EES11284 Sorghum cytosol 82.89 80.51
Os02t0675800-01 Rice cytosol 74.34 76.09
Zm00001d026078_P001 Maize cytosol 69.08 72.66
GSMUA_Achr1P03900_001 Banana cytosol 63.82 66.44
GSMUA_Achr4P27200_001 Banana cytosol 61.51 65.16
GSMUA_Achr11P... Banana cytosol 60.86 64.69
GSMUA_Achr5P03300_001 Banana cytosol 61.84 64.6
Os03t0116700-01 Rice cytosol, extracellular 60.86 62.29
GSMUA_Achr4P24870_001 Banana cytosol 61.18 61.39
KRH65151 Soybean cytosol 55.92 60.5
Os09t0525300-01 Rice cytosol 55.92 60.5
KRH48244 Soybean cytosol 55.59 60.14
VIT_15s0048g01930.t01 Wine grape cytosol 56.91 59.86
VIT_16s0100g00520.t01 Wine grape cytosol 53.29 58.06
VIT_02s0025g04380.t01 Wine grape cytosol 58.88 57.93
Solyc08g080360.2.1 Tomato plastid 54.93 57.79
PGSC0003DMT400058590 Potato plastid 54.93 57.79
CDY42484 Canola cytosol 53.62 57.19
AT3G61060.2 Thale cress cytosol 54.28 56.7
CDX89095 Canola cytosol 53.29 56.64
Bra014456.1-P Field mustard cytosol 52.96 56.29
Solyc03g026160.2.1 Tomato cytosol, extracellular 27.96 55.92
CDY57080 Canola cytosol 51.32 55.32
PGSC0003DMT400010881 Potato plastid 52.3 55.02
KRH03980 Soybean cytosol, plastid 51.64 54.9
KRG91447 Soybean cytosol, plastid 52.63 54.61
Os10t0522400-01 Rice cytosol 29.61 54.55
Bra019781.1-P Field mustard cytosol 51.32 54.36
Solyc12g056410.1.1 Tomato cytosol, plastid 51.64 54.33
KRH35368 Soybean cytosol 52.96 54.03
CDX98047 Canola cytosol 50.99 54.01
Solyc01g091700.2.1 Tomato cytosol 50.33 53.31
CDY16361 Canola extracellular 33.55 53.12
PGSC0003DMT400037131 Potato cytosol 51.64 53.04
AT1G63090.1 Thale cress cytosol 50.33 52.94
PGSC0003DMT400026564 Potato cytosol 51.32 52.88
Solyc10g017960.1.1 Tomato cytosol 50.66 52.74
KRH09123 Soybean cytosol 50.0 52.6
PGSC0003DMT400071397 Potato cytosol 49.67 52.43
Bra027618.1-P Field mustard cytosol 50.0 52.41
CDY47354 Canola cytosol 50.0 52.41
CDY49201 Canola cytosol 50.0 52.41
KRH38594 Soybean cytosol 49.67 52.25
Bra027000.1-P Field mustard cytosol 48.68 51.03
CDY45973 Canola cytosol 48.68 51.03
CDY63226 Canola plastid 48.68 51.03
CDY38901 Canola cytosol 46.05 50.36
AT5G52120.1 Thale cress cytosol 47.7 49.83
CDY32595 Canola cytosol 46.71 49.13
Bra029137.1-P Field mustard cytosol 46.71 48.97
AT1G12710.2 Thale cress cytosol 51.97 47.45
KRH57251 Soybean plastid 51.64 46.04
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 28.95 37.13
Os04t0280500-00 Rice cytosol 13.16 26.49
Os02t0813000-00 Rice cytosol 17.43 23.04
Os02t0813350-01 Rice cytosol 21.38 21.89
Os08t0150700-01 Rice cytosol 20.72 21.07
Os12t0131400-01 Rice nucleus 20.72 20.86
Os02t0813166-00 Rice cytosol, plastid 17.11 19.85
Os02t0812500-01 Rice cytosol 21.05 19.28
Os02t0813083-00 Rice extracellular 6.58 17.54
Os12t0129700-01 Rice cytosol 18.09 14.75
Os02t0812600-00 Rice extracellular 22.04 14.69
Protein Annotations
MapMan:19.2.2.8.1.4.6EntrezGene:4336716EMBL:AK064611ProteinID:BAF15519.1ProteinID:BAS90573.1ProteinID:EAZ31689.1
InterPro:F-box-like_dom_sfInterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR001810
EnsemblPlantsGene:Os04g0571300EnsemblPlants:Os04t0571300-01PFAM:PF14299InterPro:PP2-likePFscan:PS50181PANTHER:PTHR31960
PANTHER:PTHR31960:SF4UniProt:Q0JAW8SUPFAM:SSF81383UniParc:UPI000021C9FBRefSeq:XP_015633763.1RefSeq:XP_015633765.1
RefSeq:XP_015633766.1SEG:seg::::
Description
F-box protein 228Cyclin-like F-box domain containing protein. (Os04t0571300-01);Similar to OSIGBa0127A14.1 protein. (Os04t0571300-02);Cyclin-like F-box domain containing protein. (Os04t0571300-03)
Coordinates
chr4:+:28751117..28754394
Molecular Weight (calculated)
33749.0 Da
IEP (calculated)
7.184
GRAVY (calculated)
-0.298
Length
304 amino acids
Sequence
(BLAST)
001: MGAGASSMMG PEGYGRGWGQ TSLGDMPESC VAAVLLYLDP PEICKVARLN RAFRGAASAD CVWAAKLPAN YRYLAALAAA ADDDSGGDGA TEGNGSRCSS
101: AAMIKKEIYA RLCRPTPFDG GTKEFWMEKN KGGLCISISS KAMAITGIDD RRYWSHLSTE ESRFHHVAYL QQIWWLEVAG EIDFCFPAGS YSLFFRLQLG
201: RPHKYMGRRV YGYESIHGWN IKPTRFQLST SDDQQATSQY YLNEPGNWIL YHVGDFVVSS SDQLTNLKFS MMQIDCTHTK GGLCVDSVFI YPKGHRHEDC
301: TICK
Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)
001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ
Arabidopsis Description
AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.