Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0131400-01 | Rice | nucleus | 54.42 | 67.22 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 32.71 | 47.29 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 31.37 | 45.17 |
| Bra035198.1-P | Field mustard | cytosol | 30.56 | 44.53 |
| CDX87293 | Canola | cytosol | 30.56 | 44.53 |
| CDY39994 | Canola | cytosol | 30.29 | 44.14 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 31.64 | 42.75 |
| Os02t0813000-00 | Rice | cytosol | 26.01 | 42.17 |
| Os02t0813083-00 | Rice | extracellular | 12.87 | 42.11 |
| AT1G80110.1 | Thale cress | cytosol | 28.95 | 42.02 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 28.15 | 39.33 |
| Os02t0813350-01 | Rice | cytosol | 30.56 | 38.38 |
| KRH33867 | Soybean | cytosol | 25.74 | 36.36 |
| Os02t0813166-00 | Rice | cytosol, plastid | 25.47 | 36.26 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 27.35 | 35.79 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 26.54 | 35.74 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 26.54 | 35.23 |
| PGSC0003DMT400063740 | Potato | cytosol | 26.81 | 34.84 |
| Os08t0150700-01 | Rice | cytosol | 27.88 | 34.78 |
| Os02t0812500-01 | Rice | cytosol | 30.29 | 34.04 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 26.27 | 34.03 |
| KRG96762 | Soybean | cytosol | 26.01 | 33.8 |
| Solyc01g099990.2.1 | Tomato | cytosol | 26.27 | 33.79 |
| KRH68480 | Soybean | cytosol | 25.74 | 33.45 |
| PGSC0003DMT400063744 | Potato | cytosol | 24.66 | 32.62 |
| KRH68481 | Soybean | cytosol | 13.67 | 32.28 |
| Solyc01g100010.2.1 | Tomato | cytosol | 23.86 | 32.01 |
| Os04t0280500-00 | Rice | cytosol | 12.87 | 31.79 |
| Solyc01g100000.2.1 | Tomato | cytosol | 22.52 | 31.0 |
| Os02t0812600-00 | Rice | extracellular | 30.03 | 24.56 |
| Os10t0522400-01 | Rice | cytosol | 9.92 | 22.42 |
| Os03t0116700-01 | Rice | cytosol, extracellular | 16.89 | 21.21 |
| Os09t0525300-01 | Rice | cytosol | 15.28 | 20.28 |
| Os04t0571300-01 | Rice | cytosol, mitochondrion, peroxisome | 14.75 | 18.09 |
| Os02t0675800-01 | Rice | cytosol | 14.21 | 17.85 |
| Os02t0224900-01 | Rice | endoplasmic reticulum, extracellular | 6.97 | 10.97 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | EntrezGene:4351406 | ProteinID:ABA96385.2 | EMBL:AK068675 | ProteinID:BAF29086.1 |
| ProteinID:BAT15731.1 | InterPro:F-box-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:Os12g0129700 |
| EnsemblPlants:Os12t0129700-01 | PFAM:PF14299 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | UniProt:Q2QY75 |
| SUPFAM:SSF81383 | UniParc:UPI0000D89BFC | RefSeq:XP_015620470.1 | SEG:seg | : | : |
Description
F-box protein 639Cyclin-like F-box domain containing protein. (Os12t0129700-01)
Coordinates
chr12:+:1437032..1445090
Molecular Weight (calculated)
42635.6 Da
IEP (calculated)
6.891
GRAVY (calculated)
-0.467
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTWPVHSIL HADVVFLYLS GPNTGNNTGE TERYMVSINV QHREAISISK LSPDDSSPPP RYFPSSFNSY INKRSGREKG GDNVTVRTNK KAEYISGLSE
101: DCLALAISLT TPMDACRCCA VSRAFQKAAN SDSVWRHFLP KDYLSILARA DDRVHFTSEK KLLVSLVKDH VLLDQHSKSL WLERTSLAKC YLLSSRSLPI
201: AWEDHPLKWR WISLPDSRFE EVTELLKVCW LDLCGRVNCR ELSPNTEYAA YLVFKLTDDS YGLDCQTQEA DITMDDQVVS AKRTISFYPR PRPRPRPSTR
301: ETLSNMGRIE EAGQAEEPSY PRERGDGWLE VQLGHFYNDL EDTGVVVIRL KEHIQLNWKK GLILEGMEIR HNI
101: DCLALAISLT TPMDACRCCA VSRAFQKAAN SDSVWRHFLP KDYLSILARA DDRVHFTSEK KLLVSLVKDH VLLDQHSKSL WLERTSLAKC YLLSSRSLPI
201: AWEDHPLKWR WISLPDSRFE EVTELLKVCW LDLCGRVNCR ELSPNTEYAA YLVFKLTDDS YGLDCQTQEA DITMDDQVVS AKRTISFYPR PRPRPRPSTR
301: ETLSNMGRIE EAGQAEEPSY PRERGDGWLE VQLGHFYNDL EDTGVVVIRL KEHIQLNWKK GLILEGMEIR HNI
001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
Arabidopsis Description
PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.