Factsheet for GSMUA_Achr1P05750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P05730_001	Banana	cytosol	73.55	76.03
GSMUA_Achr1P05720_001	Banana	cytosol	73.19	71.89
GSMUA_Achr6P36620_001	Banana	cytosol	65.58	69.88
GSMUA_Achr1P20450_001	Banana	plastid	61.96	66.28
GSMUA_Achr5P10170_001	Banana	cytosol	27.9	48.12
Bra035198.1-P	Field mustard	cytosol	44.2	47.66
CDX87293	Canola	cytosol	44.2	47.66
VIT_14s0060g02020.t01	Wine grape	cytosol	48.91	47.37
GSMUA_Achr8P03670_001	Banana	nucleus	48.19	46.5
CDY39994	Canola	cytosol	43.12	46.48
KRH33867	Soybean	cytosol	44.2	46.21
VIT_14s0060g02000.t01	Wine grape	cytosol	48.19	46.18
VIT_14s0060g01990.t01	Wine grape	cytosol	46.01	45.85
AT1G80110.1	Thale cress	cytosol	42.39	45.53
PGSC0003DMT400063744	Potato	cytosol	45.29	44.33
PGSC0003DMT400063740	Potato	cytosol	46.01	44.25
Solyc01g099990.2.1	Tomato	cytosol	46.38	44.14
GSMUA_Achr9P02770_001	Banana	nucleus	45.29	43.86
Solyc01g100010.2.1	Tomato	cytosol	43.48	43.17
TraesCS5B01G558800.1	Wheat	nucleus	45.65	42.86
KRG96762	Soybean	cytosol	44.2	42.51
KRH68480	Soybean	cytosol	43.84	42.16
TraesCS6D01G366600.1	Wheat	cytosol	48.55	42.14
TraesCS6B01G421100.1	Wheat	cytosol	48.19	42.09
TraesCS3B01G018900.1	Wheat	cytosol	45.65	42.0
HORVU6Hr1G089430.1	Barley	cytosol, plastid	47.83	41.64
TraesCS6A01G381900.1	Wheat	cytosol	47.46	41.46
TraesCS4A01G319200.1	Wheat	cytosol	47.83	41.25
Os12t0131400-01	Rice	nucleus	44.93	41.06
TraesCS7A01G371000.1	Wheat	cytosol	42.75	40.83
Solyc01g100000.2.1	Tomato	cytosol	39.86	40.59
TraesCS5D01G566000.2	Wheat	cytosol	45.65	40.51
Os04t0280500-00	Rice	cytosol	22.1	40.4
TraesCS7D01G351500.1	Wheat	cytosol	42.03	40.28
TraesCS5B01G560100.1	Wheat	cytosol	45.65	40.26
Zm00001d051936_P001	Maize	cytosol	44.93	39.62
HORVU7Hr1G072570.3	Barley	cytosol	42.03	39.46
TraesCS7A01G530500.1	Wheat	extracellular	20.29	39.44
KRH68481	Soybean	cytosol	22.46	39.24
TraesCS5B01G559800.1	Wheat	cytosol	42.75	39.07
EES05994	Sorghum	cytosol	47.83	39.05
TraesCS7D01G300300.1	Wheat	cytosol	42.03	38.93
TraesCS7A01G304800.1	Wheat	cytosol	41.67	38.72
TraesCS7B01G205100.1	Wheat	cytosol	41.67	38.72
Os02t0812500-01	Rice	cytosol	46.01	38.25
TraesCS5B01G560000.1	Wheat	cytosol	43.48	38.22
TraesCS7D01G518300.2	Wheat	cytosol	19.57	37.76
TraesCS3B01G094500.1	Wheat	cytosol	41.67	37.58
Zm00001d032787_P001	Maize	cytosol	39.86	37.41
TraesCS3D01G079700.1	Wheat	cytosol	40.22	37.37
Zm00001d018451_P001	Maize	cytosol	46.38	37.21
HORVU3Hr1G014270.1	Barley	cytosol	42.03	37.18
TraesCS3A01G079300.1	Wheat	cytosol	40.94	37.05
Os08t0150700-01	Rice	cytosol	39.86	36.79
HORVU0Hr1G021610.3	Barley	cytosol	41.67	35.38
Zm00001d024621_P001	Maize	cytosol	39.13	35.18
HORVU6Hr1G089480.1	Barley	cytosol, extracellular	21.74	35.09
TraesCS7D01G519100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.68	33.77
TraesCS7A01G531700.1	Wheat	cytosol	37.68	33.02
TraesCS7B01G449100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.59	32.79
TraesCS7D01G518400.1	Wheat	cytosol	37.32	32.39
Os12t0129700-01	Rice	cytosol	42.75	31.64
TraesCS7B01G448100.1	Wheat	cytosol, extracellular	35.87	31.43
TraesCS7A01G530600.1	Wheat	cytosol, mitochondrion	37.32	30.03
GSMUA_Achr11P...	Banana	cytosol	19.2	29.28
OQU92610	Sorghum	mitochondrion	37.32	27.61
GSMUA_Achr4P27200_001	Banana	cytosol	28.62	27.53
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	28.62	26.69
GSMUA_Achr7P05860_001	Banana	cytosol	27.54	26.21
GSMUA_Achr5P03300_001	Banana	cytosol	27.54	26.12
GSMUA_Achr3P12400_001	Banana	cytosol	26.81	25.69
GSMUA_Achr11P...	Banana	cytosol	26.09	25.17
GSMUA_Achr4P24870_001	Banana	cytosol	27.54	25.08
GSMUA_Achr1P03900_001	Banana	cytosol	26.09	24.66

Protein Annotations

EnsemblPlants:GSMUA_Achr1P05750_001	EnsemblPlants:GSMUA_Achr1T05750_001	EnsemblPlantsGene:GSMUA_Achr1G05750_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR32278	PFAM:PF14299	SUPFAM:SSF81383	UniParc:UPI000295BB70
UniProt:M0RXD3	MapMan:35.1	:	:	:	:

Description

Putative F-box protein At2g02240 [Source:GMGC_GENE;Acc:GSMUA_Achr1G05750_001]

Coordinates

chr1:+:4711331..4712917

Molecular Weight (calculated)

30983.6 Da

IEP (calculated)

4.584

GRAVY (calculated)

-0.278

Length

276 amino acids

Sequence
(BLAST)

001: MEMGESGIES LPDLCVAHSI SLTSPRDACR LSAVSAAFRG AATSDTVWDR FLPTDWQSLV SRAVYPVEFS SSSSKRDIFF RLCDPILIDD GKMSFSLDRS
101: SGAKCYMLSA RELFITWADT PQYWTWDCLP ESRFAEVAEL IDVCWLEIRG KIESRMLSQR TTYAAYLIFR ISDVSHGLGY PPQEASVKVG GHSSTKTVCL
201: QPSDMLSHMH ARRATEEVDG APQARNDDWM ELELGEFYID EGDDGEVNIS LLEMKGGDWK KGLIIEGIEI RPKNNR

Best Arabidopsis Sequence Match ( AT2G02240.1 )
(BLAST)

001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ

Arabidopsis Description

MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.