Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 87.74 | 88.57 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 90.25 | 83.67 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 75.16 | 77.6 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 33.65 | 74.83 |
| Os04t0280500-00 | Rice | cytosol | 27.67 | 58.28 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 31.45 | 38.76 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 30.5 | 37.45 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 32.39 | 37.32 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 30.19 | 36.23 |
| AT1G80110.1 | Thale cress | cytosol | 28.62 | 35.41 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 29.56 | 35.21 |
| Bra035198.1-P | Field mustard | cytosol | 28.3 | 35.16 |
| CDX87293 | Canola | cytosol | 28.3 | 35.16 |
| CDY39994 | Canola | cytosol | 27.67 | 34.38 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 27.04 | 32.82 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 31.76 | 32.48 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 29.25 | 32.29 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 29.25 | 32.29 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 28.93 | 32.28 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 30.19 | 32.21 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 28.3 | 32.03 |
| KRH33867 | Soybean | cytosol | 26.42 | 31.82 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 29.56 | 31.65 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 30.5 | 31.6 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 27.36 | 31.41 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 31.13 | 31.13 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 28.62 | 30.85 |
| KRH68481 | Soybean | cytosol | 15.09 | 30.38 |
| PGSC0003DMT400063740 | Potato | cytosol | 27.36 | 30.31 |
| Solyc01g100000.2.1 | Tomato | cytosol | 25.79 | 30.26 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 27.67 | 29.63 |
| Solyc01g099990.2.1 | Tomato | cytosol | 26.73 | 29.31 |
| PGSC0003DMT400063744 | Potato | cytosol | 25.79 | 29.08 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 27.99 | 28.99 |
| KRG96762 | Soybean | cytosol | 25.79 | 28.57 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 27.99 | 28.43 |
| Solyc01g100010.2.1 | Tomato | cytosol | 24.53 | 28.06 |
| KRH68480 | Soybean | cytosol | 25.16 | 27.87 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 28.62 | 27.08 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 24.53 | 27.08 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 25.47 | 27.0 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 26.1 | 26.86 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 20.44 | 22.65 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 19.5 | 20.67 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 18.87 | 20.13 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 18.87 | 20.13 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 18.55 | 19.22 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 26.42 | 15.0 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G518400.1 | EnsemblPlantsGene:TraesCS7D01G518400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:616943324..616949188
Molecular Weight (calculated)
35632.2 Da
IEP (calculated)
6.919
GRAVY (calculated)
-0.370
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: METETGICDL PADCLALVAS LTSPGDVCRL AATAHALRAA ADFDAVWGSF LPADCTDILV RCSTAGDERH REGETKKELF SRLCDCPVLL DGGKLSFSLD
101: RRSGARKYMI PAKALWYGWS GYHYGGLVWS RCHPHSRFRE VAVLSYLCWV DVDVILNTKN LSGIGRGYAA YLVYRVHWLH ADTAQSQNKE DLGSSSAAIC
201: YHECNHLVPQ KHSRSLLWDW GWELDGSPSS SSSMSADTTE KHRSKKQRLT PDGVGMRSDG QWIEQEINIE LDEQCLEGKE KNVSIEFRGF TRSHRCQIII
301: EGIEIRPKGM GKFKSWLN
101: RRSGARKYMI PAKALWYGWS GYHYGGLVWS RCHPHSRFRE VAVLSYLCWV DVDVILNTKN LSGIGRGYAA YLVYRVHWLH ADTAQSQNKE DLGSSSAAIC
201: YHECNHLVPQ KHSRSLLWDW GWELDGSPSS SSSMSADTTE KHRSKKQRLT PDGVGMRSDG QWIEQEINIE LDEQCLEGKE KNVSIEFRGF TRSHRCQIII
301: EGIEIRPKGM GKFKSWLN
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.