Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 52.2 | 97.08 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 94.03 | 94.62 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 92.14 | 92.72 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 91.51 | 91.8 |
| Os02t0812500-01 | Rice | cytosol | 71.38 | 68.37 |
| Zm00001d051936_P001 | Maize | cytosol | 66.67 | 67.73 |
| EES05994 | Sorghum | cytosol | 70.75 | 66.57 |
| Zm00001d018451_P001 | Maize | cytosol | 67.3 | 62.21 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 42.14 | 51.74 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 41.82 | 51.55 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 40.88 | 49.06 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 42.14 | 48.55 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 38.68 | 46.07 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 41.82 | 45.08 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 41.2 | 44.11 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 43.08 | 43.77 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 41.82 | 43.32 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 38.36 | 42.81 |
| AT1G80110.1 | Thale cress | cytosol | 34.59 | 42.8 |
| Bra035198.1-P | Field mustard | cytosol | 34.28 | 42.58 |
| CDX87293 | Canola | cytosol | 34.28 | 42.58 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 38.05 | 42.01 |
| CDY39994 | Canola | cytosol | 33.65 | 41.8 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 34.28 | 41.6 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 37.42 | 41.32 |
| KRH33867 | Soybean | cytosol | 33.96 | 40.91 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 35.53 | 40.79 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 34.91 | 39.5 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 36.79 | 39.26 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 35.85 | 38.38 |
| PGSC0003DMT400063740 | Potato | cytosol | 34.59 | 38.33 |
| PGSC0003DMT400063744 | Potato | cytosol | 33.96 | 38.3 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 37.42 | 38.26 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 36.48 | 37.78 |
| Solyc01g100010.2.1 | Tomato | cytosol | 33.02 | 37.77 |
| Solyc01g099990.2.1 | Tomato | cytosol | 33.96 | 37.24 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 38.68 | 36.61 |
| KRH68480 | Soybean | cytosol | 32.39 | 35.89 |
| Solyc01g100000.2.1 | Tomato | cytosol | 30.5 | 35.79 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 16.04 | 35.66 |
| KRG96762 | Soybean | cytosol | 31.76 | 35.19 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 33.02 | 35.0 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 30.5 | 33.68 |
| KRH68481 | Soybean | cytosol | 16.35 | 32.91 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 31.76 | 32.79 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 31.76 | 32.69 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 31.13 | 31.13 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 22.96 | 25.44 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 21.38 | 22.67 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 21.07 | 22.48 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 20.75 | 21.5 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 20.13 | 21.48 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 32.39 | 18.39 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G366600.1 | EnsemblPlantsGene:TraesCS6D01G366600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:454939514..454941178
Molecular Weight (calculated)
34964.6 Da
IEP (calculated)
5.931
GRAVY (calculated)
-0.207
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCAAAAAAA IYRLPEECVA HAIAMTTPGD ALSSSAVSPA FRAAADSHAV WDRFLPPDHA AVLARADDAG DHLGRSKKEL FTRLCSRPVL LDGATMSFGL
101: DRRSGAKCWM LSARALSIVW VDDPSCWIWT ADLPGSRFPE VAELVDVCWL EITGKLQLSL LSPRTTYAAY LVYAIADDSY GLECNIGILP PKATVTVVIS
201: GNGTKPTSTA ASTSTENTIC LQHMQGEEET AMHRRRQEYV RPRKNYGWKL VREADMDIRC PRRRGDDGWT EVELGEFAVA GEEDGVVEVS LKEVECRRWK
301: RGLIVQGIEI RPKHTNSN
101: DRRSGAKCWM LSARALSIVW VDDPSCWIWT ADLPGSRFPE VAELVDVCWL EITGKLQLSL LSPRTTYAAY LVYAIADDSY GLECNIGILP PKATVTVVIS
201: GNGTKPTSTA ASTSTENTIC LQHMQGEEET AMHRRRQEYV RPRKNYGWKL VREADMDIRC PRRRGDDGWT EVELGEFAVA GEEDGVVEVS LKEVECRRWK
301: RGLIVQGIEI RPKHTNSN
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.