Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G560100.1 | Wheat | cytosol | 90.03 | 89.46 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 67.85 | 65.94 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 41.48 | 50.0 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 40.51 | 45.65 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 37.94 | 45.56 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 38.26 | 44.91 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 36.98 | 43.07 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 38.59 | 42.11 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 35.05 | 41.6 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 39.23 | 41.36 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 37.94 | 40.97 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 38.91 | 40.74 |
| Bra035198.1-P | Field mustard | cytosol | 33.44 | 40.62 |
| CDX87293 | Canola | cytosol | 33.44 | 40.62 |
| CDY39994 | Canola | cytosol | 33.44 | 40.62 |
| KRH33867 | Soybean | cytosol | 34.41 | 40.53 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 35.69 | 40.07 |
| PGSC0003DMT400063740 | Potato | cytosol | 36.66 | 39.72 |
| Solyc01g099990.2.1 | Tomato | cytosol | 36.66 | 39.31 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 35.37 | 39.15 |
| AT1G80110.1 | Thale cress | cytosol | 32.15 | 38.91 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 38.26 | 38.76 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 37.94 | 38.44 |
| PGSC0003DMT400063744 | Potato | cytosol | 34.73 | 38.3 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 35.05 | 37.85 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 38.26 | 37.42 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 17.04 | 37.06 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 37.3 | 37.06 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 35.37 | 36.91 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 39.55 | 36.61 |
| KRH68480 | Soybean | cytosol | 33.76 | 36.59 |
| Solyc01g100010.2.1 | Tomato | cytosol | 32.48 | 36.33 |
| KRG96762 | Soybean | cytosol | 33.12 | 35.89 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 33.44 | 35.02 |
| Solyc01g100000.2.1 | Tomato | cytosol | 29.9 | 34.32 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 32.15 | 33.33 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 30.55 | 32.99 |
| KRH68481 | Soybean | cytosol | 16.4 | 32.28 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 32.48 | 31.76 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 31.51 | 31.72 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.87 | 31.17 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 22.51 | 22.8 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 20.58 | 22.3 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 20.26 | 21.0 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 19.29 | 20.13 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 18.97 | 19.8 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 32.15 | 17.86 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G566000.2 | EnsemblPlantsGene:TraesCS5D01G566000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | SUPFAM:SSF81383 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5D:-:564121997..564124216
Molecular Weight (calculated)
34104.0 Da
IEP (calculated)
4.733
GRAVY (calculated)
-0.338
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTVKQARK EDEEQASGGI QRIPEECLEK AIGLTSPADA CRAATVSAVF RSAADSDAVW EQFLPPDCDA VLERAVHLVD SSSKKDLFME LSDEHVLLDD
101: GKRSFGLHRS TGAKCYMLSS SELAIAWGKI DLYWRERLDP DSRFPMVAEL MSVCWFSIFG VINSRELSPG THYAAYLVFK LTHDASGLSS RSQISKVEVG
201: GQVVGSARTA SLHPCNRASC SGAAIGEASS STMNNNCVVN QPHEHKDEDE GGIVRYPRER VDGWLELEIG DFHTSAGDDA GADVPMGLHE FEELQWKKGL
301: ILEGIEIRPK N
101: GKRSFGLHRS TGAKCYMLSS SELAIAWGKI DLYWRERLDP DSRFPMVAEL MSVCWFSIFG VINSRELSPG THYAAYLVFK LTHDASGLSS RSQISKVEVG
201: GQVVGSARTA SLHPCNRASC SGAAIGEASS STMNNNCVVN QPHEHKDEDE GGIVRYPRER VDGWLELEIG DFHTSAGDDA GADVPMGLHE FEELQWKKGL
301: ILEGIEIRPK N
001: MTKTRCMHEH FRKIVQRVKK TLRLSASDKS HGVAELDDLP EECVSIIVSF TSPQDACVLA SVSKTFASAV KSDIVWEKFI PPEYESLISQ SRAFKFLSKK
101: ELYFALCDKS VLIDDGKKSL WIEKANAKRC IMISAMNLAI AWGNSPQSWR WIPDPQARFE TVAELLEVCL FEIRGRINSR VISPKTRYSA YIVYKKLNIC
201: YGFENVAVEV VVGVVGQDLE ESCRRYICFD ETMDEQFRRR DRGKNLVKPE RRKDGWMEIK IGEFFNEGGL LNDDEIEMVA LEAKQRHWKR GLIIQGIEIR
301: PTNIR
101: ELYFALCDKS VLIDDGKKSL WIEKANAKRC IMISAMNLAI AWGNSPQSWR WIPDPQARFE TVAELLEVCL FEIRGRINSR VISPKTRYSA YIVYKKLNIC
201: YGFENVAVEV VVGVVGQDLE ESCRRYICFD ETMDEQFRRR DRGKNLVKPE RRKDGWMEIK IGEFFNEGGL LNDDEIEMVA LEAKQRHWKR GLIIQGIEIR
301: PTNIR
Arabidopsis Description
PP2B8Putative F-box protein PP2-B8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.