Factsheet for GSMUA_Achr1P05730_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P05720_001	Banana	cytosol	77.9	74.02
GSMUA_Achr1P05750_001	Banana	cytosol	76.03	73.55
GSMUA_Achr6P36620_001	Banana	cytosol	59.18	61.0
GSMUA_Achr1P20450_001	Banana	plastid	57.3	59.3
KRH33867	Soybean	cytosol	46.82	47.35
VIT_14s0060g02020.t01	Wine grape	cytosol	49.44	46.32
VIT_14s0060g01990.t01	Wine grape	cytosol	47.94	46.21
Bra035198.1-P	Field mustard	cytosol	42.32	44.14
CDX87293	Canola	cytosol	42.32	44.14
PGSC0003DMT400063740	Potato	cytosol	46.82	43.55
VIT_14s0060g02000.t01	Wine grape	cytosol	46.82	43.4
CDY39994	Canola	cytosol	41.57	43.36
AT1G80110.1	Thale cress	cytosol	41.57	43.19
Solyc01g099990.2.1	Tomato	cytosol	46.44	42.76
GSMUA_Achr8P03670_001	Banana	nucleus	45.69	42.66
PGSC0003DMT400063744	Potato	cytosol	44.94	42.55
KRG96762	Soybean	cytosol	45.32	42.16
KRH68480	Soybean	cytosol	44.94	41.81
Solyc01g100010.2.1	Tomato	cytosol	43.45	41.73
GSMUA_Achr9P02770_001	Banana	nucleus	44.19	41.4
GSMUA_Achr5P10170_001	Banana	cytosol	24.72	41.25
Solyc01g100000.2.1	Tomato	cytosol	40.45	39.85
TraesCS5B01G558800.1	Wheat	nucleus	43.45	39.46
TraesCS6D01G366600.1	Wheat	cytosol	46.07	38.68
TraesCS6B01G421100.1	Wheat	cytosol	45.32	38.29
TraesCS3B01G018900.1	Wheat	cytosol	42.7	38.0
TraesCS6A01G381900.1	Wheat	cytosol	44.94	37.97
KRH68481	Soybean	cytosol	22.47	37.97
HORVU6Hr1G089430.1	Barley	cytosol, plastid	44.94	37.85
TraesCS7A01G371000.1	Wheat	cytosol	40.82	37.72
Os12t0131400-01	Rice	nucleus	42.32	37.42
TraesCS4A01G319200.1	Wheat	cytosol	44.57	37.19
TraesCS7D01G351500.1	Wheat	cytosol	40.07	37.15
Os04t0280500-00	Rice	cytosol	20.97	37.09
TraesCS5D01G566000.2	Wheat	cytosol	43.07	36.98
TraesCS5B01G560100.1	Wheat	cytosol	42.7	36.42
HORVU7Hr1G072570.3	Barley	cytosol	40.07	36.39
TraesCS7D01G300300.1	Wheat	cytosol	40.45	36.24
Zm00001d032787_P001	Maize	cytosol	39.33	35.71
Os02t0812500-01	Rice	cytosol	44.19	35.54
TraesCS7B01G205100.1	Wheat	cytosol	39.33	35.35
TraesCS7A01G304800.1	Wheat	cytosol	39.33	35.35
EES05994	Sorghum	cytosol	44.57	35.21
Zm00001d051936_P001	Maize	cytosol	41.2	35.14
TraesCS5B01G559800.1	Wheat	cytosol	39.7	35.1
Os08t0150700-01	Rice	cytosol	38.95	34.78
TraesCS3A01G079300.1	Wheat	cytosol	39.7	34.75
TraesCS3D01G079700.1	Wheat	cytosol	38.58	34.68
TraesCS3B01G094500.1	Wheat	cytosol	39.7	34.64
TraesCS7A01G530500.1	Wheat	extracellular	18.35	34.51
TraesCS5B01G560000.1	Wheat	cytosol	40.45	34.39
HORVU3Hr1G014270.1	Barley	cytosol	40.07	34.29
TraesCS7D01G518300.2	Wheat	cytosol	18.35	34.27
Zm00001d024621_P001	Maize	cytosol	38.95	33.88
Zm00001d018451_P001	Maize	cytosol	43.45	33.72
HORVU0Hr1G021610.3	Barley	cytosol	39.7	32.62
TraesCS7D01G519100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.33	31.49
TraesCS7B01G449100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.96	31.17
TraesCS7A01G531700.1	Wheat	cytosol	35.96	30.48
HORVU6Hr1G089480.1	Barley	cytosol, extracellular	19.48	30.41
TraesCS7D01G518400.1	Wheat	cytosol	35.21	29.56
GSMUA_Achr11P...	Banana	cytosol	19.85	29.28
TraesCS7B01G448100.1	Wheat	cytosol, extracellular	34.08	28.89
Os12t0129700-01	Rice	cytosol	39.33	28.15
TraesCS7A01G530600.1	Wheat	cytosol, mitochondrion	35.58	27.7
OQU92610	Sorghum	mitochondrion	36.33	26.01
GSMUA_Achr3P12400_001	Banana	cytosol	25.84	23.96
GSMUA_Achr4P27200_001	Banana	cytosol	25.47	23.69
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	26.22	23.65
GSMUA_Achr7P05860_001	Banana	cytosol	25.47	23.45
GSMUA_Achr11P...	Banana	cytosol	24.72	23.08
GSMUA_Achr5P03300_001	Banana	cytosol	25.09	23.02
GSMUA_Achr1P03900_001	Banana	cytosol	24.34	22.26
GSMUA_Achr4P24870_001	Banana	cytosol	24.72	21.78

Protein Annotations

EnsemblPlants:GSMUA_Achr1P05730_001	EnsemblPlants:GSMUA_Achr1T05730_001	EnsemblPlantsGene:GSMUA_Achr1G05730_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR32278	PFAM:PF14299	SUPFAM:SSF81383	UniParc:UPI000295ABD8
UniProt:M0RXD1	MapMan:35.1	:	:	:	:

Description

Putative F-box protein At2g02240 [Source:GMGC_GENE;Acc:GSMUA_Achr1G05730_001]

Coordinates

chr1:+:4700114..4702107

Molecular Weight (calculated)

30464.0 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.273

Length

267 amino acids

Sequence
(BLAST)

001: MEKGESRTEK LPELCIVHAI SLTSPRVASR LSAVSTTFRA AATSDTVWDR FLPSDWQSLV SRAVHPVDFS SFSSKRDIFF RLCDPILIDD GKMSFSLDRS
101: SGAKCYVLSA RKLSITWADA PWYWKWRCLP ESRFADVAEL LDVYWLEIRG KIESRMLSQK TAYAAYLIYR TSDEAYGLTN PSQEASVKVG VYTSTKLVSP
201: KARNDDWMEL ELGEFYTDEG DDGEVNISLL EVKGNYLKSG LIIEGIEIRP KQRYPFHANE IYSFSWL

Best Arabidopsis Sequence Match ( AT2G02240.1 )
(BLAST)

001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ

Arabidopsis Description

MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.