Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G079700.1 | Wheat | cytosol | 82.37 | 86.53 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 83.97 | 85.9 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 83.33 | 84.97 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 79.17 | 84.01 |
| Os08t0150700-01 | Rice | cytosol | 62.82 | 65.55 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 61.86 | 59.38 |
| Zm00001d024621_P001 | Maize | cytosol | 57.05 | 57.98 |
| Zm00001d032787_P001 | Maize | cytosol | 53.21 | 56.46 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 35.9 | 43.24 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 35.58 | 43.02 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 37.18 | 42.03 |
| OQU92610 | Sorghum | mitochondrion | 49.68 | 41.55 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 34.29 | 40.07 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 34.94 | 37.85 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 31.73 | 37.79 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 34.29 | 37.54 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 33.33 | 37.01 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 37.5 | 36.91 |
| KRH33867 | Soybean | cytosol | 30.77 | 36.36 |
| Bra035198.1-P | Field mustard | cytosol | 29.81 | 36.33 |
| CDX87293 | Canola | cytosol | 29.81 | 36.33 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 32.05 | 36.1 |
| CDY39994 | Canola | cytosol | 29.49 | 35.94 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 38.78 | 35.8 |
| AT1G80110.1 | Thale cress | cytosol | 29.17 | 35.41 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 33.01 | 34.92 |
| PGSC0003DMT400063740 | Potato | cytosol | 31.41 | 34.15 |
| Solyc01g100000.2.1 | Tomato | cytosol | 29.17 | 33.58 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 36.22 | 33.24 |
| Solyc01g099990.2.1 | Tomato | cytosol | 30.77 | 33.1 |
| KRH68480 | Soybean | cytosol | 30.13 | 32.75 |
| KRG96762 | Soybean | cytosol | 30.13 | 32.75 |
| PGSC0003DMT400063744 | Potato | cytosol | 28.85 | 31.91 |
| Solyc01g100010.2.1 | Tomato | cytosol | 28.21 | 31.65 |
| KRH68481 | Soybean | cytosol | 16.03 | 31.65 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 30.45 | 31.35 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 16.99 | 30.99 |
| HORVU4Hr1G086110.1 | Barley | cytosol | 14.74 | 30.26 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 22.12 | 24.04 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 23.08 | 23.84 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 12.5 | 22.94 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 11.86 | 21.76 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 11.22 | 20.59 |
| HORVU4Hr1G040780.1 | Barley | mitochondrion, plastid | 7.69 | 19.2 |
| HORVU2Hr1G094960.4 | Barley | cytosol | 11.86 | 18.69 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G014270.1 | EnsemblPlantsGene:HORVU3Hr1G014270 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 |
| PFAM:PF00646 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0002968435 | UniProt:M0XYB1 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:32628679..32632369
Molecular Weight (calculated)
33340.4 Da
IEP (calculated)
5.440
GRAVY (calculated)
-0.153
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSHGPGTSM SMSMATAAAE EEEEDRTRLC DLPEACVAHV LALTSPRDAC RCAAVSPCFR DAAESDAVWA RFLPPDYRAI LQLHQAPAPA RSFPLSRSGS
101: TAGAGAASSK KETYLGLSDV AALVDGGGGG MAVWLARGSG AKCVALSARR LSLPWEDGEF SWRWTPHPLS RFADVAQLVD CTCLDIYGRL PTAELTPATA
201: YAAYLVFATT DAHRGLSFPD QETTVSVGRS APCRQTVCLR PDTAEARRFR GGNVEARGPA QRGDGWWEVE MGRLRTGDGA AVVGEEVAVS FEMLGWYPKR
301: GLVVEGVEFR PL
101: TAGAGAASSK KETYLGLSDV AALVDGGGGG MAVWLARGSG AKCVALSARR LSLPWEDGEF SWRWTPHPLS RFADVAQLVD CTCLDIYGRL PTAELTPATA
201: YAAYLVFATT DAHRGLSFPD QETTVSVGRS APCRQTVCLR PDTAEARRFR GGNVEARGPA QRGDGWWEVE MGRLRTGDGA AVVGEEVAVS FEMLGWYPKR
301: GLVVEGVEFR PL
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.