Factsheet for HORVU1Hr1G048700.4

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

plastid 1
cytosol 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G048690.1	Barley	peroxisome	56.29	100.0
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	97.02	97.67
TraesCS1D01G187700.1	Wheat	cytosol, plasma membrane	97.02	97.67
TraesCS1A01G188700.1	Wheat	plasma membrane	96.69	96.05
Zm00001d029673_P001	Maize	plasma membrane	79.8	81.42
EER94629	Sorghum	plasma membrane	81.13	81.4
HORVU4Hr1G086110.1	Barley	cytosol	34.77	69.08
HORVU2Hr1G094960.4	Barley	cytosol	44.04	67.17
VIT_16s0100g00520.t01	Wine grape	cytosol	57.28	62.01
HORVU5Hr1G055050.1	Barley	mitochondrion	34.11	60.59
HORVU2Hr1G049730.1	Barley	cytosol	34.11	60.59
VIT_15s0048g01930.t01	Wine grape	cytosol	56.62	59.17
KRH03980	Soybean	cytosol, plastid	55.63	58.74
KRH65151	Soybean	cytosol	54.64	58.72
KRG91447	Soybean	cytosol, plastid	56.95	58.7
AT3G61060.2	Thale cress	cytosol	56.29	58.42
KRH48244	Soybean	cytosol	54.3	58.36
Solyc08g080360.2.1	Tomato	plastid	55.3	57.79
PGSC0003DMT400058590	Potato	plastid	55.3	57.79
KRH35368	Soybean	cytosol	56.95	57.72
HORVU5Hr1G080530.1	Barley	cytosol	54.64	57.49
CDY57080	Canola	cytosol	53.64	57.45
CDY16361	Canola	extracellular	36.42	57.29
Bra014456.1-P	Field mustard	cytosol	53.97	56.99
CDX89095	Canola	cytosol	53.97	56.99
CDY42484	Canola	cytosol	53.64	56.84
HORVU4Hr1G040780.1	Barley	mitochondrion, plastid	23.51	56.8
Bra019781.1-P	Field mustard	cytosol	53.97	56.79
VIT_02s0025g04380.t01	Wine grape	cytosol	57.95	56.63
CDX98047	Canola	cytosol	53.64	56.45
PGSC0003DMT400010881	Potato	plastid	53.97	56.4
Bra027000.1-P	Field mustard	cytosol	53.97	56.21
CDY47354	Canola	cytosol	53.97	56.21
Bra027618.1-P	Field mustard	cytosol	53.64	55.86
CDY63226	Canola	plastid	53.64	55.86
CDY49201	Canola	cytosol	53.64	55.86
CDY45973	Canola	cytosol	53.64	55.86
Solyc12g056410.1.1	Tomato	cytosol, plastid	53.31	55.71
AT1G63090.1	Thale cress	cytosol	52.98	55.36
KRH09123	Soybean	cytosol	52.98	55.36
KRH38594	Soybean	cytosol	52.32	54.67
Solyc03g026160.2.1	Tomato	cytosol, extracellular	26.82	53.29
Solyc10g017960.1.1	Tomato	cytosol	50.99	52.74
PGSC0003DMT400071397	Potato	cytosol	50.0	52.43
Solyc01g091700.2.1	Tomato	cytosol	49.67	52.26
CDY38901	Canola	cytosol	47.35	51.44
CDY32595	Canola	cytosol	48.68	50.87
PGSC0003DMT400026564	Potato	cytosol	49.34	50.51
AT5G52120.1	Thale cress	cytosol	48.34	50.17
Bra029137.1-P	Field mustard	cytosol	48.01	50.0
KRH57251	Soybean	plastid	56.29	49.85
AT1G12710.2	Thale cress	cytosol	53.64	48.65
PGSC0003DMT400037131	Potato	cytosol	47.02	47.97
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	37.42	47.68
HORVU2Hr1G104500.6	Barley	cytosol	21.19	24.43
HORVU7Hr1G072570.3	Barley	cytosol	23.18	23.81
HORVU3Hr1G014270.1	Barley	cytosol	23.84	23.08
HORVU0Hr1G021610.3	Barley	cytosol	23.51	21.85
HORVU6Hr1G089430.1	Barley	cytosol, plastid	22.85	21.77
HORVU7Hr1G012610.1	Barley	cytosol	20.53	21.02
HORVU6Hr1G090000.1	Barley	cytosol, plastid	22.85	20.41
HORVU6Hr1G090010.2	Barley	cytosol, nucleus, plastid	22.52	20.0
HORVU5Hr1G124090.2	Barley	cytosol	17.88	17.82
HORVU6Hr1G089480.1	Barley	cytosol, extracellular	8.94	15.79

Protein Annotations

EMBL:AK363761	EnsemblPlants:HORVU1Hr1G048700.4	EnsemblPlantsGene:HORVU1Hr1G048700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF10	PFAM:PF14299	SEG:seg
SUPFAM:SSF81383	UniParc:UPI0002006582	UniProt:F2DIP3	MapMan:19.2.2.8.1.4.6	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DIP3]

Coordinates

chrchr1H:+:361358431..361361053

Molecular Weight (calculated)

33646.3 Da

IEP (calculated)

9.200

GRAVY (calculated)

-0.262

Length

302 amino acids

Sequence
(BLAST)

001: MGAGVSSFLF GVGGPAAEAA PGAAGLGDLP ELCAAQVLLR LDAPEICRLA RLNHAFRGAA GADFVWEAKL PENYRHLIGY VEGGGEEGRR RRRRAGTKEI
101: YARLSRPVSF DDGTKEFWLE KSKGRVCMAL SSKALVITGI DDRRYWTHMP TTESRFQSVA YLQQIWWFEV VGELDFCFPV GTYSLYFRVH LGKFSKRFGR
201: RVCSTEHVHG WNKKPVRFQL STSDGQNALS QCYLDEPGSW VLYHAGDFVS SKPGQSLKLK FSMAQIDCTH TKGGLCVDSV LVYPKGFQQE KVVTGKISEM
301: RS

Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.