Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G371000.1 | Wheat | cytosol | 82.15 | 92.39 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 80.92 | 91.32 |
| Os08t0150700-01 | Rice | cytosol | 60.0 | 65.22 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 57.23 | 63.27 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 59.38 | 61.86 |
| Zm00001d032787_P001 | Maize | cytosol | 49.85 | 55.1 |
| Zm00001d024621_P001 | Maize | cytosol | 51.69 | 54.72 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 36.0 | 45.35 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 35.69 | 44.79 |
| OQU92610 | Sorghum | mitochondrion | 48.62 | 42.36 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 35.38 | 41.67 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 32.62 | 39.7 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 31.69 | 39.31 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 32.0 | 36.49 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 31.08 | 36.46 |
| KRH33867 | Soybean | cytosol | 29.54 | 36.36 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 31.38 | 36.3 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 32.0 | 36.11 |
| PGSC0003DMT400063744 | Potato | cytosol | 29.85 | 34.4 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 33.54 | 34.38 |
| Solyc01g100000.2.1 | Tomato | cytosol | 28.62 | 34.32 |
| Solyc01g100010.2.1 | Tomato | cytosol | 29.23 | 34.17 |
| Bra035198.1-P | Field mustard | cytosol | 26.77 | 33.98 |
| CDX87293 | Canola | cytosol | 26.77 | 33.98 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 35.08 | 33.73 |
| CDY39994 | Canola | cytosol | 26.46 | 33.59 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 35.08 | 33.53 |
| PGSC0003DMT400063740 | Potato | cytosol | 29.54 | 33.45 |
| Solyc01g099990.2.1 | Tomato | cytosol | 29.85 | 33.45 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 30.15 | 33.22 |
| AT1G80110.1 | Thale cress | cytosol | 26.15 | 33.07 |
| KRG96762 | Soybean | cytosol | 28.92 | 32.75 |
| KRH68480 | Soybean | cytosol | 28.62 | 32.4 |
| KRH68481 | Soybean | cytosol | 14.77 | 30.38 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 28.31 | 30.36 |
| HORVU4Hr1G086110.1 | Barley | cytosol | 14.15 | 30.26 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 14.77 | 28.07 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 12.62 | 24.12 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 21.85 | 23.51 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 20.0 | 22.65 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 11.69 | 22.35 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 10.77 | 20.59 |
| HORVU4Hr1G040780.1 | Barley | mitochondrion, plastid | 7.69 | 20.0 |
| HORVU2Hr1G094960.4 | Barley | cytosol | 11.69 | 19.19 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G021610.3 | EnsemblPlantsGene:HORVU0Hr1G021610 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SMART:SM00256 | SUPFAM:SSF81383 |
| UniParc:UPI000B487B88 | UniProt:A0A287E6S3 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:113010460..113012336
Molecular Weight (calculated)
36478.1 Da
IEP (calculated)
5.508
GRAVY (calculated)
-0.399
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: LELEARLTIN RLCSQFSSPD KQRNPHLLQK PRSYIMDTAS TATAEEEVTR LEDLPESCLA HVLALTSPRD ACRCATVSPS FREAAESDAV WDRFLPPDYR
101: AILLRCCSGR TPPLSSKKDA YLWLSNGAVR VDEGDTAVWL AKESGAKCVA LSARKLSLPW DDGEFSWRWT PHPRSSRFAE VAQLVHCTGL EIYGRLPAAA
201: LTPRTDYAAY LVFDVADEGH RGLSFPDQET TVAVGGRAAS RHAVCLRPDD DEACKFRGVA RADGHDGVRR PARREDRWAE MEMGRLRIDE AMALEKEEEV
301: MVSFEVLEWY PKRGLIIEAV EFRPV
101: AILLRCCSGR TPPLSSKKDA YLWLSNGAVR VDEGDTAVWL AKESGAKCVA LSARKLSLPW DDGEFSWRWT PHPRSSRFAE VAQLVHCTGL EIYGRLPAAA
201: LTPRTDYAAY LVFDVADEGH RGLSFPDQET TVAVGGRAAS RHAVCLRPDD DEACKFRGVA RADGHDGVRR PARREDRWAE MEMGRLRIDE AMALEKEEEV
301: MVSFEVLEWY PKRGLIIEAV EFRPV
001: MTKTRCMHVH FRKILQRVKK TLRLSASDQQ SQGVTEPLSL GDLPEECISL IISFTSPRDA CVFALVSKTF ESAVQSDIVW EKFIPPEYES LLSRSQHFSS
101: KKELFFALCD ESVLINVSKK DLWIEKATGK RCMMLSASAL NLSTHHTWKW ITNPVSAWLE TVPELLTTRW FEIRCRTNTR FLSPRTRYSV YIVFLKADIC
201: YGFAYVAMEA VVRMVGHELS ESCRRYVCFH EAMEWQFLTR KNLVNPERRE DGWMEIEIGE FFNEGAFRNN DEIEMSVSET TQRNTKRGLI IQGIEIRPTK
301: KPGNEMP
101: KKELFFALCD ESVLINVSKK DLWIEKATGK RCMMLSASAL NLSTHHTWKW ITNPVSAWLE TVPELLTTRW FEIRCRTNTR FLSPRTRYSV YIVFLKADIC
201: YGFAYVAMEA VVRMVGHELS ESCRRYVCFH EAMEWQFLTR KNLVNPERRE DGWMEIEIGE FFNEGAFRNN DEIEMSVSET TQRNTKRGLI IQGIEIRPTK
301: KPGNEMP
Arabidopsis Description
PP2B7F-box protein PP2-B7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.