Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87293 | Canola | cytosol | 98.05 | 98.05 |
| AT1G80110.1 | Thale cress | cytosol | 77.73 | 77.43 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 46.48 | 46.12 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 46.09 | 45.56 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 46.48 | 43.12 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 43.36 | 41.57 |
| CDY24793 | Canola | cytosol | 23.44 | 41.38 |
| CDY62670 | Canola | cytosol | 4.69 | 41.38 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 42.19 | 40.91 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 42.19 | 40.75 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 46.09 | 40.0 |
| Os04t0280500-00 | Rice | cytosol | 23.05 | 39.07 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 39.45 | 38.55 |
| CDY09378 | Canola | cytosol | 40.62 | 38.52 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 44.53 | 38.38 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 44.53 | 38.38 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 44.14 | 38.05 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 44.14 | 38.05 |
| Os02t0813000-00 | Rice | cytosol | 33.98 | 37.83 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 38.67 | 37.79 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 37.5 | 37.5 |
| CDY17599 | Canola | cytosol | 41.41 | 37.46 |
| Os12t0131400-01 | Rice | nucleus | 44.14 | 37.42 |
| EES05998 | Sorghum | cytosol | 40.62 | 37.41 |
| KXG28410 | Sorghum | cytosol | 39.45 | 37.41 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 41.02 | 37.37 |
| CDY03056 | Canola | cytosol | 22.66 | 36.94 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 43.36 | 36.76 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 37.5 | 36.64 |
| EES05996 | Sorghum | cytosol | 39.84 | 36.56 |
| OQU85929 | Sorghum | cytosol | 40.62 | 36.49 |
| CDY09382 | Canola | cytosol | 37.89 | 36.47 |
| GSMUA_Achr8P03670_001 | Banana | nucleus | 40.62 | 36.36 |
| Os02t0813350-01 | Rice | cytosol | 42.19 | 36.36 |
| CDY65051 | Canola | cytosol | 32.03 | 36.28 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 22.66 | 36.25 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 41.8 | 36.15 |
| CDY63170 | Canola | cytosol | 35.16 | 36.14 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 42.97 | 35.83 |
| CDY70803 | Canola | cytosol | 37.11 | 35.71 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 41.02 | 35.59 |
| CDY09376 | Canola | cytosol | 26.95 | 35.57 |
| CDY03057 | Canola | cytosol | 32.81 | 35.44 |
| GSMUA_Achr9P02770_001 | Banana | nucleus | 39.45 | 35.44 |
| KXG31333 | Sorghum | cytosol | 41.8 | 35.2 |
| KXG31332 | Sorghum | cytosol | 41.8 | 35.08 |
| CDY17605 | Canola | cytosol | 40.23 | 35.03 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 42.97 | 35.03 |
| CDY72024 | Canola | plastid | 37.11 | 34.93 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 42.97 | 34.92 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 41.8 | 34.85 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 42.58 | 34.82 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 41.02 | 34.77 |
| TraesCS5B01G558800.1 | Wheat | nucleus | 39.84 | 34.69 |
| CDY09379 | Canola | cytosol | 33.59 | 34.68 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 37.11 | 34.67 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 19.14 | 34.51 |
| Os02t0813166-00 | Rice | cytosol, plastid | 35.16 | 34.35 |
| CDY03058 | Canola | cytosol | 38.28 | 34.27 |
| CDY17600 | Canola | cytosol | 38.28 | 34.27 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 19.14 | 34.27 |
| CDY09383 | Canola | cytosol | 40.62 | 34.21 |
| Os02t0813083-00 | Rice | extracellular | 15.23 | 34.21 |
| CDY71953 | Canola | cytosol | 37.11 | 34.17 |
| TraesCS5B01G559800.1 | Wheat | cytosol | 40.23 | 34.11 |
| CDY31110 | Canola | plastid | 35.94 | 34.07 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 42.19 | 34.07 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 39.84 | 34.0 |
| CDY17601 | Canola | cytosol | 39.06 | 33.9 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 39.45 | 33.89 |
| CDX95006 | Canola | cytosol | 36.72 | 33.81 |
| Zm00001d053172_P001 | Maize | cytosol | 39.06 | 33.78 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 41.8 | 33.65 |
| CDX88110 | Canola | cytosol | 16.02 | 33.61 |
| TraesCS5B01G560100.1 | Wheat | cytosol | 41.02 | 33.55 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 41.41 | 33.54 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 44.53 | 33.53 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 40.62 | 33.44 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 44.14 | 33.43 |
| CDY17602 | Canola | cytosol | 40.62 | 33.33 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 43.75 | 33.33 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 41.02 | 33.23 |
| TraesCS4A01G041300.1 | Wheat | plastid | 41.41 | 33.12 |
| CDY15823 | Canola | cytosol | 42.58 | 32.83 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 41.02 | 32.81 |
| TraesCSU01G190600.1 | Wheat | cytosol, mitochondrion | 41.02 | 32.81 |
| TraesCSU01G197600.1 | Wheat | cytosol, mitochondrion | 41.02 | 32.81 |
| CDY68805 | Canola | cytosol | 21.88 | 32.37 |
| Zm00001d051936_P001 | Maize | cytosol | 39.45 | 32.27 |
| Os02t0812500-01 | Rice | cytosol | 41.8 | 32.23 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 36.72 | 31.97 |
| EES05994 | Sorghum | cytosol | 42.19 | 31.95 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 37.11 | 31.88 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 35.94 | 31.83 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 37.5 | 31.68 |
| CDY03060 | Canola | cytosol | 39.84 | 31.68 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 36.72 | 31.65 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 35.55 | 31.6 |
| TraesCS5B01G560000.1 | Wheat | cytosol | 38.67 | 31.53 |
| CDY09375 | Canola | cytosol | 35.94 | 31.51 |
| CDY38992 | Canola | cytosol | 34.77 | 31.45 |
| CDY54100 | Canola | cytosol | 34.77 | 31.45 |
| Os08t0150700-01 | Rice | cytosol | 36.72 | 31.44 |
| CDY03062 | Canola | cytosol | 39.06 | 31.35 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 35.16 | 31.25 |
| CDY09380 | Canola | cytosol | 38.67 | 31.23 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 35.94 | 30.98 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 35.94 | 30.98 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 35.94 | 30.67 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 12.89 | 30.56 |
| Os12t0129700-01 | Rice | cytosol | 44.14 | 30.29 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 36.33 | 30.1 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 35.94 | 30.07 |
| Zm00001d032787_P001 | Maize | cytosol | 34.38 | 29.93 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 35.55 | 29.84 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 29.69 | 29.57 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 35.94 | 29.49 |
| CDY03059 | Canola | cytosol | 38.28 | 29.43 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 19.53 | 29.24 |
| Zm00001d018451_P001 | Maize | cytosol | 39.06 | 29.07 |
| Zm00001d024621_P001 | Maize | cytosol | 34.77 | 28.99 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 34.77 | 28.9 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 31.25 | 28.88 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 35.16 | 28.57 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 34.38 | 28.57 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 23.83 | 28.24 |
| TraesCS3A01G082500.1 | Wheat | plastid | 23.05 | 28.1 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 26.17 | 27.8 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 34.38 | 27.67 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 33.59 | 26.46 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 32.42 | 26.35 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 33.59 | 25.07 |
| Os02t0812600-00 | Rice | extracellular | 44.53 | 25.0 |
| CDX73584 | Canola | cytosol | 26.95 | 23.79 |
| CDX78140 | Canola | cytosol | 26.95 | 22.92 |
| CDY65052 | Canola | cytosol | 38.28 | 22.69 |
| CDX79690 | Canola | cytosol | 25.39 | 22.11 |
| CDX84551 | Canola | cytosol | 25.0 | 21.77 |
| CDY57080 | Canola | cytosol | 23.83 | 21.63 |
| OQU92610 | Sorghum | mitochondrion | 31.25 | 21.45 |
| CDX89095 | Canola | cytosol | 23.83 | 21.33 |
| CDY42484 | Canola | cytosol | 23.44 | 21.05 |
| CDX98047 | Canola | cytosol | 23.44 | 20.91 |
| CDY45973 | Canola | cytosol | 23.44 | 20.69 |
| CDY47354 | Canola | cytosol | 23.44 | 20.69 |
| CDY63226 | Canola | plastid | 23.44 | 20.69 |
| CDY49201 | Canola | cytosol | 23.05 | 20.34 |
| CDY16361 | Canola | extracellular | 14.45 | 19.27 |
| CDY32595 | Canola | cytosol | 21.48 | 19.03 |
| CDY38901 | Canola | cytosol | 20.31 | 18.7 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 37.11 | 16.96 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 20.31 | 16.1 |
| OQU85932 | Sorghum | mitochondrion | 34.38 | 15.69 |
Protein Annotations
| EnsemblPlants:CDY39994 | EnsemblPlantsGene:GSBRNA2T00068887001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PFAM:PF00646 |
| PFAM:PF14299 | PFscan:PS50181 | ProteinID:CDY39994 | ProteinID:CDY39994.1 | SMART:SM00256 | SUPFAM:SSF81383 |
| UniParc:UPI0004EAE6EC | UniProt:A0A078HRT7 | MapMan:35.1 | : | : | : |
Description
BnaC06g40720DBnaC06g40720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRT7]
Coordinates
chrLK032461:+:307552..308989
Molecular Weight (calculated)
29440.2 Da
IEP (calculated)
6.601
GRAVY (calculated)
-0.346
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNLPEDCIA KILSLTSPRD VCRSSAVSRC FRSAADSDHV WNHFLPSEFP EDFRAPEGLP TKKHLFFSLV HNPLLLHDSQ LSFSLERSTG NKCYMMAARA
101: LNITWGHDQR YWQWISLPDA RFKEVAALKM VWWLDITGKI NISLLSDDTL YAAYLVFKWN LDPYGFRQPV EASLVLAGTE HDDVQPSMVS LMHNPGSEQG
201: QRAELRSDDW YEVQLGQFFK RRGDMGEIEM SLKETKRPFE KKGLIVHGIE IRPVLP
101: LNITWGHDQR YWQWISLPDA RFKEVAALKM VWWLDITGKI NISLLSDDTL YAAYLVFKWN LDPYGFRQPV EASLVLAGTE HDDVQPSMVS LMHNPGSEQG
201: QRAELRSDDW YEVQLGQFFK RRGDMGEIEM SLKETKRPFE KKGLIVHGIE IRPVLP
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.