Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G262300.1 | Wheat | cytosol | 79.06 | 95.47 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 77.81 | 94.32 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 66.25 | 80.92 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 60.62 | 74.05 |
| TraesCS7A01G063400.1 | Wheat | cytosol | 28.44 | 71.65 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 23.75 | 70.37 |
| TraesCSU01G197600.1 | Wheat | cytosol, mitochondrion | 65.62 | 65.62 |
| TraesCSU01G190600.1 | Wheat | cytosol, mitochondrion | 65.62 | 65.62 |
| TraesCS7A01G063500.1 | Wheat | cytosol | 23.44 | 61.98 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 55.94 | 60.27 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 55.62 | 59.93 |
| Os02t0813350-01 | Rice | cytosol | 53.44 | 57.58 |
| EES05998 | Sorghum | cytosol | 49.38 | 56.83 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 55.62 | 56.51 |
| EES05996 | Sorghum | cytosol | 47.81 | 54.84 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 50.94 | 53.97 |
| OQU85929 | Sorghum | cytosol | 46.56 | 52.28 |
| Os02t0813166-00 | Rice | cytosol, plastid | 42.5 | 51.91 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 38.75 | 48.25 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 36.25 | 45.31 |
| Os02t0813083-00 | Rice | extracellular | 15.94 | 44.74 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 20.94 | 41.88 |
| Bra035198.1-P | Field mustard | cytosol | 33.44 | 41.8 |
| CDX87293 | Canola | cytosol | 33.44 | 41.8 |
| CDY39994 | Canola | cytosol | 33.12 | 41.41 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 36.88 | 41.4 |
| AT1G80110.1 | Thale cress | cytosol | 32.5 | 40.47 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 35.62 | 39.58 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 39.06 | 39.56 |
| KRH33867 | Soybean | cytosol | 31.88 | 38.64 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 33.44 | 38.63 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 16.88 | 38.03 |
| PGSC0003DMT400063740 | Potato | cytosol | 33.44 | 37.28 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 33.12 | 36.68 |
| Solyc01g099990.2.1 | Tomato | cytosol | 32.81 | 36.21 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 35.62 | 35.62 |
| KRH68480 | Soybean | cytosol | 30.94 | 34.49 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 31.56 | 34.01 |
| KRG96762 | Soybean | cytosol | 30.0 | 33.45 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 31.56 | 33.11 |
| PGSC0003DMT400063744 | Potato | cytosol | 28.75 | 32.62 |
| Solyc01g100000.2.1 | Tomato | cytosol | 27.5 | 32.47 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 31.88 | 32.38 |
| Solyc01g100010.2.1 | Tomato | cytosol | 28.12 | 32.37 |
| TraesCS3A01G082500.1 | Wheat | plastid | 20.62 | 31.43 |
| KRH68481 | Soybean | cytosol | 14.69 | 29.75 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 29.69 | 27.7 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 24.06 | 26.83 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 21.88 | 23.49 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 20.62 | 22.15 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 20.94 | 22.04 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 20.94 | 21.9 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G041300.1 | EnsemblPlantsGene:TraesCS4A01G041300 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF2 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.1 |
Description
No Description!
Coordinates
chr4A:+:34677791..34680475
Molecular Weight (calculated)
35215.1 Da
IEP (calculated)
6.174
GRAVY (calculated)
-0.241
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVVCTKAT GLHLFKISIA CLACFAPNQS IKSTSSRVFR HRIEHSQAAE AEEEPMEPGQ CEIARLPEEI LSAALSRTSP RDACRAAAVS PAFRAAADSD
101: AVWACFLPPP ADLPPLADGE LLLPPRGKKG LFLRLSGSPA LLPGGLSMWL DRESGAKCYM VPARDLSIAW RDTPRYWTSW IHLADSRFPE SAQLRFVCWL
201: EIRGRIHSKM LSRGSAYANY MVYKLDDESY GLDWPADASV SIGGTDLARK VCLQPNPQRS HAEDVVLPRE RGDGWMELEL GEFVCEGDED GDVSFGLAET
301: KRLNGKGGLI MQGIEIRHKN
101: AVWACFLPPP ADLPPLADGE LLLPPRGKKG LFLRLSGSPA LLPGGLSMWL DRESGAKCYM VPARDLSIAW RDTPRYWTSW IHLADSRFPE SAQLRFVCWL
201: EIRGRIHSKM LSRGSAYANY MVYKLDDESY GLDWPADASV SIGGTDLARK VCLQPNPQRS HAEDVVLPRE RGDGWMELEL GEFVCEGDED GDVSFGLAET
301: KRLNGKGGLI MQGIEIRHKN
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.