Factsheet for TraesCS2A01G400100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G397700.1	Wheat	cytosol	99.33	99.33
TraesCS2B01G418200.2	Wheat	cytosol	98.99	97.36
HORVU2Hr1G094960.4	Barley	cytosol	63.76	95.96
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	83.89	82.24
TraesCS6A01G256100.1	Wheat	cytosol	78.52	78.52
EES11284	Sorghum	cytosol	81.21	77.32
Zm00001d026078_P001	Maize	cytosol	67.79	69.9
GSMUA_Achr11P...	Banana	cytosol	62.42	65.03
GSMUA_Achr4P27200_001	Banana	cytosol	62.08	64.46
GSMUA_Achr1P03900_001	Banana	cytosol	62.75	64.04
GSMUA_Achr5P03300_001	Banana	cytosol	61.74	63.23
GSMUA_Achr4P24870_001	Banana	cytosol	62.75	61.72
KRH65151	Soybean	cytosol	57.05	60.5
KRH48244	Soybean	cytosol	56.38	59.79
TraesCS1A01G188700.1	Wheat	plasma membrane	60.4	59.21
VIT_15s0048g01930.t01	Wine grape	cytosol	57.38	59.17
TraesCS5A01G312700.1	Wheat	cytosol	56.71	58.88
PGSC0003DMT400058590	Potato	plastid	55.7	57.44
Solyc08g080360.2.1	Tomato	plastid	55.7	57.44
CDY42484	Canola	cytosol	54.7	57.19
CDX89095	Canola	cytosol	54.36	56.64
VIT_16s0100g00520.t01	Wine grape	cytosol	53.02	56.63
AT3G61060.2	Thale cress	cytosol	55.03	56.36
VIT_02s0025g04380.t01	Wine grape	cytosol	58.39	56.31
Bra014456.1-P	Field mustard	cytosol	54.03	56.29
CDY57080	Canola	cytosol	53.02	56.03
CDY16361	Canola	extracellular	35.91	55.73
KRH03980	Soybean	cytosol, plastid	53.36	55.59
TraesCS5A01G525700.1	Wheat	cytosol	57.05	55.56
Bra019781.1-P	Field mustard	cytosol	52.68	54.7
KRG91447	Soybean	cytosol, plastid	53.69	54.61
CDX98047	Canola	cytosol	52.35	54.36
PGSC0003DMT400010881	Potato	plastid	52.68	54.33
KRH35368	Soybean	cytosol	54.03	54.03
Solyc12g056410.1.1	Tomato	cytosol, plastid	52.01	53.63
CDY47354	Canola	cytosol	52.01	53.45
CDY49201	Canola	cytosol	52.01	53.45
Bra027618.1-P	Field mustard	cytosol	52.01	53.45
AT1G63090.1	Thale cress	cytosol	51.34	52.94
KRH09123	Soybean	cytosol	51.34	52.94
KRH38594	Soybean	cytosol	51.01	52.6
Solyc10g017960.1.1	Tomato	cytosol	51.34	52.4
CDY63226	Canola	plastid	50.67	52.07
Bra027000.1-P	Field mustard	cytosol	50.67	52.07
CDY45973	Canola	cytosol	50.67	52.07
PGSC0003DMT400026564	Potato	cytosol	51.34	51.86
Solyc01g091700.2.1	Tomato	cytosol	49.66	51.57
PGSC0003DMT400071397	Potato	cytosol	49.66	51.39
Solyc03g026160.2.1	Tomato	cytosol, extracellular	26.17	51.32
CDY38901	Canola	cytosol	46.64	50.0
PGSC0003DMT400037131	Potato	cytosol	48.66	48.99
AT5G52120.1	Thale cress	cytosol	47.65	48.8
CDY32595	Canola	cytosol	46.98	48.44
Bra029137.1-P	Field mustard	cytosol	46.98	48.28
AT1G12710.2	Thale cress	cytosol	52.68	47.15
KRH57251	Soybean	plastid	53.36	46.63
TraesCS7A01G530500.1	Wheat	extracellular	13.42	28.17
TraesCS7A01G063600.1	Wheat	cytosol, nucleus, peroxisome	20.47	23.28
TraesCS7A01G063400.1	Wheat	cytosol	9.73	22.83
TraesCS6A01G384000.2	Wheat	cytosol	22.48	22.56
TraesCS7A01G371000.1	Wheat	cytosol	21.48	22.15
TraesCS6A01G384100.1	Wheat	cytosol	21.81	21.89
TraesCS4A01G320400.1	Wheat	cytosol	18.79	21.88
TraesCS4A01G041300.1	Wheat	plastid	23.49	21.88
TraesCS7A01G304800.1	Wheat	cytosol	21.48	21.55
TraesCS3A01G079300.1	Wheat	cytosol	21.48	20.98
TraesCS6A01G381900.1	Wheat	cytosol	22.15	20.89
TraesCS6A01G383900.1	Wheat	cytosol	21.48	20.32
TraesCS4A01G319200.1	Wheat	cytosol	21.48	20.0
TraesCS7A01G531700.1	Wheat	cytosol	20.13	19.05
TraesCS7A01G063500.1	Wheat	cytosol	7.38	18.18
TraesCS7A01G063200.1	Wheat	cytosol	6.38	17.59
TraesCS7A01G530600.1	Wheat	cytosol, mitochondrion	20.13	17.49
TraesCS3A01G082500.1	Wheat	plastid	10.74	15.24

Protein Annotations

EnsemblPlants:TraesCS2A01G400100.1	EnsemblPlantsGene:TraesCS2A01G400100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF4	PFAM:PF14299
PFscan:PS50181	SEG:seg	SUPFAM:SSF81383	MapMan:19.2.2.8.1.4.6	:	:

Description

No Description!

Coordinates

chr2A:-:653370118..653373084

Molecular Weight (calculated)

33104.1 Da

IEP (calculated)

6.661

GRAVY (calculated)

-0.315

Length

298 amino acids

Sequence
(BLAST)

001: MGAGASSMEG SEGWGQTSLG DMPESCVAPV LLYLDPPEIC LVARLNRAFR GAASADCVWA TKLPANYRYL AALAAAADDD SSSDGSVEGN GRCSSSVATK
101: KEKYARLCRP TPFDGGTKEF WIQKSKGGLC MSISSKALAI TGIDDRRYWS HLTTDESRFH SVAYLQQIWW LEVAGEIDFC FPAGSYSLLF RLHLGRPHKR
201: MGRRVYDSEL IYGWDIKPTR FQLSTSDGQH TTSDYHLDGP GHWILYHVGD FVISSSDELT KLKFSMMQID CTHTKGGLCV DSVFIYPKDH QPEECIRK

Best Arabidopsis Sequence Match ( AT5G52120.1 )
(BLAST)

001: MGAASSSIVR SEPFAGKLCG LEDVPENCIT AMFMYMEPPE ICLLARVNKS FHRASRSDAV WEDKLPSNYK FLVRRILEDQ QQVGVKDKLI YRKKEIYARL
101: CRPNLFDTGT KEAWLDKRSG KVFLAISPKA MKITGIDDRR YWEHISSDES RFGSITYLRQ IWWLEAVGKI RFEFAPGKYS LLFKIQLGKP IRKCGRKTCS
201: LDQVHGWDIK PVRFQLSTSD GQCAMSERHL DESGRWVYHH AGDFVVENQN SPVWVKFSML QIDCTHTKGG LCLDCVIICP FEYRGKYKYS D

Arabidopsis Description

PP2A14F-box protein PP2-A14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ80]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.