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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 7
  • cytosol 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, plasma membrane, plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g080360.2.1 Tomato plastid 96.89 96.89
PGSC0003DMT400010881 Potato plastid 77.16 77.16
KRH03980 Soybean cytosol, plastid 64.71 65.38
HORVU1Hr1G048690.1 Barley peroxisome 38.06 64.71
CDY57080 Canola cytosol 62.98 64.54
VIT_02s0025g04380.t01 Wine grape cytosol 68.17 63.75
Bra019781.1-P Field mustard cytosol 62.98 63.41
CDX98047 Canola cytosol 62.63 63.07
HORVU2Hr1G094960.4 Barley cytosol 42.56 62.12
GSMUA_Achr4P27200_001 Banana cytosol 58.82 59.23
AT1G63090.1 Thale cress cytosol 58.48 58.48
Zm00001d029673_P001 Maize plasma membrane 59.52 58.11
CDY47354 Canola cytosol 58.13 57.93
EER94629 Sorghum plasma membrane 60.21 57.81
CDY49201 Canola cytosol 57.79 57.59
Bra027618.1-P Field mustard cytosol 57.79 57.59
GSMUA_Achr1P03900_001 Banana cytosol 58.13 57.53
GSMUA_Achr5P03300_001 Banana cytosol 57.79 57.39
Bra027000.1-P Field mustard cytosol 57.44 57.24
EER95641 Sorghum cytosol 58.13 57.14
GSMUA_Achr11P... Banana cytosol 56.4 56.99
PGSC0003DMT400071397 Potato cytosol 56.75 56.94
Os03t0116700-01 Rice cytosol, extracellular 58.48 56.9
CDY63226 Canola plastid 57.09 56.9
CDY45973 Canola cytosol 57.09 56.9
TraesCS6D01G237300.1 Wheat cytosol 58.13 56.38
TraesCS6A01G256100.1 Wheat cytosol 58.13 56.38
CDY16361 Canola extracellular 37.37 56.25
Os02t0675800-01 Rice cytosol 57.79 56.23
TraesCS6B01G269300.1 Wheat cytosol 57.79 56.04
Zm00001d027361_P001 Maize cytosol 57.79 56.04
TraesCS1D01G187700.1 Wheat cytosol, plasma membrane 58.13 56.0
Os09t0525300-01 Rice cytosol 54.33 55.87
GSMUA_Achr4P24870_001 Banana cytosol 58.48 55.78
TraesCS2D01G397700.1 Wheat cytosol 57.44 55.7
TraesCS2A01G400100.1 Wheat cytosol 57.44 55.7
TraesCS1B01G196400.1 Wheat cytosol, plasma membrane 57.79 55.67
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 57.79 55.3
Os04t0571300-01 Rice cytosol, mitochondrion, peroxisome 57.79 54.93
TraesCS1A01G188700.1 Wheat plasma membrane 57.79 54.93
GSMUA_Achr3P12400_001 Banana cytosol 54.67 54.86
TraesCS2B01G418200.2 Wheat cytosol 57.44 54.79
TraesCS5D01G319500.1 Wheat cytosol 54.33 54.7
TraesCS5A01G312700.1 Wheat cytosol 53.98 54.36
HORVU5Hr1G080530.1 Barley cytosol 53.98 54.36
KRH57251 Soybean plastid 64.01 54.25
TraesCS5B01G313700.1 Wheat cytosol 53.98 54.17
KXG31015 Sorghum cytosol 56.4 54.15
Zm00001d051447_P002 Maize cytosol 55.36 54.05
Zm00001d021224_P001 Maize cytosol 55.02 53.72
PGSC0003DMT400026564 Potato cytosol 54.67 53.56
GSMUA_Achr7P05860_001 Banana cytosol 53.63 53.45
EER99217 Sorghum cytosol 55.02 53.18
AT1G12710.2 Thale cress cytosol 61.25 53.15
TraesCS4B01G356300.1 Wheat cytosol 54.67 51.47
GSMUA_Achr11P... Banana cytosol 31.83 50.83
TraesCS4D01G350000.1 Wheat cytosol 53.98 50.81
TraesCS5A01G525700.1 Wheat cytosol 53.63 50.65
EES11284 Sorghum cytosol 54.67 50.48
PGSC0003DMT400028899 Potato cytosol 49.83 48.98
PGSC0003DMT400037131 Potato cytosol 49.83 48.65
PGSC0003DMT400072413 Potato cytosol 49.13 48.63
PGSC0003DMT400006947 Potato cytosol 49.13 47.49
Os10t0522400-01 Rice cytosol 26.99 47.27
Zm00001d026078_P001 Maize cytosol 47.06 47.06
HORVU4Hr1G086110.1 Barley cytosol 23.53 44.74
Zm00001d024256_P001 Maize cytosol, mitochondrion 35.99 41.77
Zm00001d021854_P001 Maize cytosol 12.11 39.77
Zm00001d035636_P001 Maize plastid 33.56 37.16
HORVU2Hr1G049730.1 Barley cytosol 20.76 35.29
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 28.37 34.6
HORVU5Hr1G055050.1 Barley mitochondrion 20.07 34.12
PGSC0003DMT400083888 Potato cytosol 24.22 26.52
PGSC0003DMT400043434 Potato cytosol 24.22 26.32
PGSC0003DMT400060018 Potato cytosol 26.99 24.92
PGSC0003DMT400027718 Potato cytosol 25.26 24.33
PGSC0003DMT400063744 Potato cytosol 23.53 24.11
PGSC0003DMT400096249 Potato cytosol 21.11 23.83
PGSC0003DMT400063740 Potato cytosol 23.53 23.69
PGSC0003DMT400076213 Potato cytosol 19.03 23.61
PGSC0003DMT400061566 Potato cytosol 23.88 23.47
PGSC0003DMT400043441 Potato cytosol 21.11 23.37
PGSC0003DMT400031292 Potato cytosol 23.88 23.23
PGSC0003DMT400054296 Potato cytosol 24.22 21.74
PGSC0003DMT400014139 Potato cytosol 22.84 20.89
PGSC0003DMT400061562 Potato cytosol 23.53 20.67
PGSC0003DMT400097622 Potato cytosol, mitochondrion 15.92 20.54
PGSC0003DMT400034146 Potato cytosol 10.03 17.58
PGSC0003DMT400034143 Potato cytosol 9.34 16.46
Protein Annotations
EnsemblPlants:PGSC0003DMT400058590EnsemblPlantsGene:PGSC0003DMG400022762EntrezGene:102578361GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810InterPro:PP2-likePANTHER:PTHR31960PANTHER:PTHR31960:SF2
PFAM:PF14299PFscan:PS50181PGSC:PGSC0003DMG400022762RefSeq:XP_006358868.1SUPFAM:SSF81383UniParc:UPI000296A563
UniProt:M1C2Y0MapMan:19.2.2.8.1.4.6::::
Description
F-box family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400022762]
Coordinates
chr8:-:54028896..54031633
Molecular Weight (calculated)
32745.1 Da
IEP (calculated)
8.825
GRAVY (calculated)
-0.251
Length
289 amino acids
Sequence
(BLAST)
001: MGSSFSVLIP QFSSTVTKQN HSSLGDLPES CVASVLVYMD PPQICKLSML NRAFRGASSA DFVWESKLPM NYSSIIQRVF AGRNFPANLC KRDIYAMLCR
101: PNSFDGGSKK VWLDKRTGRV CMSISSSGLA ITGIDDRRYW SRIETDESRF KSVAYLQQIW WFEVDGEVDF PFPVGSYSIF FRLQVGRASR RFGRRVCNSE
201: HVHGWDKKPV RFQLSTSDGQ QATTQCYLNE PGIWKYHHVG DFVATGSVEP MKVKYSLTQI DCTHTKGGLC VDSVLICPVE FTERLKQSF
Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)
001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F
Arabidopsis Description
AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.