Factsheet for Os09t0525300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G312700.1	Wheat	cytosol	83.27	81.53
TraesCS5D01G319500.1	Wheat	cytosol	83.27	81.53
HORVU5Hr1G080530.1	Barley	cytosol	82.56	80.84
TraesCS5B01G313700.1	Wheat	cytosol	82.56	80.56
EER99217	Sorghum	cytosol	82.92	77.93
Zm00001d021224_P001	Maize	cytosol	81.49	77.36
GSMUA_Achr3P12400_001	Banana	cytosol	65.48	63.89
GSMUA_Achr7P05860_001	Banana	cytosol	64.77	62.76
VIT_15s0048g01930.t01	Wine grape	cytosol	61.21	59.52
Zm00001d024256_P001	Maize	cytosol, mitochondrion	51.6	58.23
GSMUA_Achr11P...	Banana	cytosol	36.65	56.91
VIT_16s0100g00520.t01	Wine grape	cytosol	56.23	56.63
KRH65151	Soybean	cytosol	56.58	56.58
CDY16361	Canola	extracellular	38.43	56.25
KRH03980	Soybean	cytosol, plastid	56.94	55.94
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	60.5	55.92
Os03t0116700-01	Rice	cytosol, extracellular	59.07	55.89
KRH48244	Soybean	cytosol	55.52	55.52
CDY42484	Canola	cytosol	56.23	55.44
CDX89095	Canola	cytosol	56.23	55.24
Bra014456.1-P	Field mustard	cytosol	56.23	55.24
Solyc10g017960.1.1	Tomato	cytosol	56.94	54.79
Solyc08g080360.2.1	Tomato	plastid	56.23	54.67
PGSC0003DMT400058590	Potato	plastid	55.87	54.33
Os02t0675800-01	Rice	cytosol	57.3	54.21
CDY57080	Canola	cytosol	54.09	53.9
AT3G61060.2	Thale cress	cytosol	55.52	53.61
Solyc03g026160.2.1	Tomato	cytosol, extracellular	28.83	53.29
Zm00001d035636_P001	Maize	plastid	49.47	53.26
VIT_02s0025g04380.t01	Wine grape	cytosol	58.36	53.07
PGSC0003DMT400026564	Potato	cytosol	55.52	52.88
Solyc12g056410.1.1	Tomato	cytosol, plastid	54.09	52.6
KRG91447	Soybean	cytosol, plastid	54.8	52.56
Bra019781.1-P	Field mustard	cytosol	53.38	52.26
PGSC0003DMT400010881	Potato	plastid	53.74	52.25
KRH35368	Soybean	cytosol	55.16	52.01
CDX98047	Canola	cytosol	53.02	51.92
CDY47354	Canola	cytosol	53.38	51.72
CDY49201	Canola	cytosol	53.38	51.72
Bra027618.1-P	Field mustard	cytosol	53.38	51.72
KRH38594	Soybean	cytosol	53.02	51.56
PGSC0003DMT400071397	Potato	cytosol	52.67	51.39
Solyc01g091700.2.1	Tomato	cytosol	51.96	50.87
CDY45973	Canola	cytosol	52.31	50.69
Bra027000.1-P	Field mustard	cytosol	52.31	50.69
CDY63226	Canola	plastid	52.31	50.69
KRH09123	Soybean	cytosol	51.96	50.52
AT1G63090.1	Thale cress	cytosol	51.25	49.83
CDY38901	Canola	cytosol	48.75	49.28
CDY32595	Canola	cytosol	49.82	48.44
Bra029137.1-P	Field mustard	cytosol	49.47	47.93
Os10t0522400-01	Rice	cytosol	28.11	47.88
AT5G52120.1	Thale cress	cytosol	49.47	47.77
PGSC0003DMT400037131	Potato	cytosol	50.18	47.64
KRH57251	Soybean	plastid	57.3	47.21
AT1G12710.2	Thale cress	cytosol	53.74	45.35
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	28.47	33.76
Os04t0280500-00	Rice	cytosol	15.3	28.48
Os02t0813000-00	Rice	cytosol	19.22	23.48
Os02t0813350-01	Rice	cytosol	23.49	22.22
Os12t0131400-01	Rice	nucleus	23.84	22.19
Os08t0150700-01	Rice	cytosol	21.71	20.4
Os02t0812500-01	Rice	cytosol	23.49	19.88
Os02t0813166-00	Rice	cytosol, plastid	18.15	19.47
Os02t0813083-00	Rice	extracellular	6.76	16.67
Os12t0129700-01	Rice	cytosol	20.28	15.28
Os02t0812600-00	Rice	extracellular	22.06	13.6

Protein Annotations

EnsemblPlants:Os09t0525300-01	EnsemblPlantsGene:Os09g0525300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF9	PFAM:PF00646
PFAM:PF14299	PFscan:PS50181	ProteinID:BAF25632.1	ProteinID:BAT09038.1	SEG:seg	SUPFAM:SSF81383
UniParc:UPI0000DD9834	UniProt:Q0J083	MapMan:19.2.2.8.1.4.6	:	:	:

Description

F-box protein 500Cyclin-like F-box domain containing protein. (Os09t0525300-01)

Coordinates

chr9:-:20522759..20525406

Molecular Weight (calculated)

31357.6 Da

IEP (calculated)

9.056

GRAVY (calculated)

-0.246

Length

281 amino acids

Sequence
(BLAST)

001: MGGVTSSSAG GGGGGETALG DLPESCVAEV LRRLDPPEIC RMARLSRTFH GVWEAKLPRN YARLLAVAAD GEAAALEAIP KKEVYARLCR RNRLDGGTKE
101: FWLDKGGGGV CMTISSRALS ITGIDDRRYW NFIPNDESRF HAVAYLSQIW WFEVRGEVEF CFPEGTYSLF FRLHLGRPLK RLGRRVYSSE HIHGWDIKPV
201: RFQLSTSDGQ QAQSKCYLTD PGVWINHHVG DFVVKSSNEL VKIQFAMVQI DCTHTKGGLC VDSVAVKPQY LAKKKASRIY V

Best Arabidopsis Sequence Match ( AT3G61060.1 )
(BLAST)

001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKE LWIDKNTGRL CLSISSKALR ITGIDDRRYW SHIPTDESRF QSAAYVQQIW WFEVGGEFEI QFPSGTYSLF FRIQLGKTSK RLGRRICNSE
201: HIHGWDIKPV RFQLATSDNQ QAVSLCYLNN NPGSWSHYHV GDFKVTNPDV STGIKFSMTQ IDCTHTKGGL CIDSVLILPK ECAKEVIGSQ

Arabidopsis Description

AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.