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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019781.1-P Field mustard cytosol 99.3 99.3
CDY57080 Canola cytosol 93.73 95.39
AT1G12710.2 Thale cress cytosol 84.32 72.67
CDY47354 Canola cytosol 73.17 72.41
CDY49201 Canola cytosol 73.17 72.41
CDY16361 Canola extracellular 48.08 71.88
CDY45973 Canola cytosol 72.13 71.38
CDY63226 Canola plastid 71.78 71.03
KRH03980 Soybean cytosol, plastid 64.81 65.03
PGSC0003DMT400058590 Potato plastid 63.07 62.63
Solyc08g080360.2.1 Tomato plastid 62.72 62.28
HORVU1Hr1G048690.1 Barley peroxisome 36.59 61.76
PGSC0003DMT400010881 Potato plastid 60.98 60.55
Solyc12g056410.1.1 Tomato cytosol, plastid 60.98 60.55
VIT_02s0025g04380.t01 Wine grape cytosol 64.46 59.87
HORVU2Hr1G094960.4 Barley cytosol 40.77 59.09
CDY42484 Canola cytosol 56.1 56.49
CDX89095 Canola cytosol 56.1 56.29
GSMUA_Achr4P27200_001 Banana cytosol 55.75 55.75
GSMUA_Achr1P03900_001 Banana cytosol 56.1 55.14
KRH57251 Soybean plastid 65.16 54.84
GSMUA_Achr4P24870_001 Banana cytosol 57.49 54.46
GSMUA_Achr11P... Banana cytosol 54.01 54.2
TraesCS1D01G187700.1 Wheat cytosol, plasma membrane 56.45 54.0
GSMUA_Achr5P03300_001 Banana cytosol 54.7 53.95
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 56.45 53.64
Zm00001d029673_P001 Maize plasma membrane 55.05 53.38
TraesCS1B01G196400.1 Wheat cytosol, plasma membrane 55.75 53.33
Os09t0525300-01 Rice cytosol 51.92 53.02
TraesCS1A01G188700.1 Wheat plasma membrane 56.1 52.96
EER94629 Sorghum plasma membrane 55.4 52.82
TraesCS2D01G397700.1 Wheat cytosol 54.7 52.68
CDX73584 Canola cytosol 52.96 52.41
TraesCS2A01G400100.1 Wheat cytosol 54.36 52.35
Os03t0116700-01 Rice cytosol, extracellular 54.01 52.19
EER99217 Sorghum cytosol 54.36 52.17
Zm00001d021224_P001 Maize cytosol 53.66 52.03
TraesCS5D01G319500.1 Wheat cytosol 51.92 51.92
TraesCS5B01G313700.1 Wheat cytosol 51.92 51.74
Zm00001d027361_P001 Maize cytosol 53.66 51.68
HORVU5Hr1G080530.1 Barley cytosol 51.57 51.57
TraesCS5A01G312700.1 Wheat cytosol 51.57 51.57
Os02t0675800-01 Rice cytosol 53.31 51.52
GSMUA_Achr7P05860_001 Banana cytosol 51.92 51.38
EER95641 Sorghum cytosol 52.61 51.36
CDX78140 Canola cytosol 53.66 51.16
TraesCS2B01G418200.2 Wheat cytosol 54.01 51.16
Os04t0571300-01 Rice cytosol, mitochondrion, peroxisome 54.01 50.99
KXG31015 Sorghum cytosol 53.31 50.83
CDY38901 Canola cytosol 49.13 50.72
GSMUA_Achr3P12400_001 Banana cytosol 50.87 50.69
TraesCS6A01G256100.1 Wheat cytosol 52.26 50.34
TraesCS6B01G269300.1 Wheat cytosol 52.26 50.34
TraesCS6D01G237300.1 Wheat cytosol 52.26 50.34
GSMUA_Achr11P... Banana cytosol 31.36 49.72
CDX79690 Canola cytosol 50.87 49.66
CDY32595 Canola cytosol 49.83 49.48
Zm00001d051447_P002 Maize cytosol 50.17 48.65
CDX84551 Canola cytosol 49.83 48.64
TraesCS4B01G356300.1 Wheat cytosol 51.92 48.53
TraesCS5A01G525700.1 Wheat cytosol 51.22 48.04
EES11284 Sorghum cytosol 52.26 47.92
TraesCS4D01G350000.1 Wheat cytosol 51.22 47.88
Os10t0522400-01 Rice cytosol 26.83 46.67
HORVU4Hr1G086110.1 Barley cytosol 23.0 43.42
Zm00001d026078_P001 Maize cytosol 43.21 42.91
Zm00001d024256_P001 Maize cytosol, mitochondrion 34.84 40.16
Zm00001d035636_P001 Maize plastid 33.45 36.78
Zm00001d021854_P001 Maize cytosol 11.15 36.36
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 29.62 35.87
HORVU2Hr1G049730.1 Barley cytosol 19.86 33.53
HORVU5Hr1G055050.1 Barley mitochondrion 19.86 33.53
CDY03057 Canola cytosol 23.69 28.69
CDY17599 Canola cytosol 27.18 27.56
CDY09378 Canola cytosol 25.44 27.04
CDY31110 Canola plastid 25.44 27.04
CDY72024 Canola plastid 25.44 26.84
CDX95006 Canola cytosol 25.44 26.26
CDY71953 Canola cytosol 25.44 26.26
CDY09382 Canola cytosol 24.04 25.94
CDY70803 Canola cytosol 24.04 25.94
CDY38992 Canola cytosol 25.44 25.8
CDY54100 Canola cytosol 25.09 25.44
CDY09379 Canola cytosol 21.95 25.4
CDY63170 Canola cytosol 21.95 25.3
CDY65051 Canola cytosol 19.86 25.22
CDY17605 Canola cytosol 25.44 24.83
CDY09376 Canola cytosol 16.72 24.74
CDX88110 Canola cytosol 10.45 24.59
CDY17600 Canola cytosol 24.04 24.13
CDY03058 Canola cytosol 23.69 23.78
CDY24793 Canola cytosol 11.85 23.45
CDX87293 Canola cytosol 20.91 23.44
CDY39994 Canola cytosol 20.91 23.44
CDY09375 Canola cytosol 23.69 23.29
CDY03062 Canola cytosol 25.44 22.88
CDY09380 Canola cytosol 24.74 22.4
CDY17601 Canola cytosol 23.0 22.37
CDY17602 Canola cytosol 24.04 22.12
CDY03060 Canola cytosol 24.74 22.05
CDY09383 Canola cytosol 22.65 21.38
CDY03056 Canola cytosol 11.15 20.38
CDY15823 Canola cytosol 23.34 20.18
CDY03059 Canola cytosol 23.0 19.82
CDY68805 Canola cytosol 11.85 19.65
CDY65052 Canola cytosol 24.39 16.2
CDX95004 Canola peroxisome, plasma membrane, vacuole 15.68 13.93
CDY62670 Canola cytosol 1.39 13.79
CDX80451 Canola cytosol, endoplasmic reticulum, plasma membrane 10.1 13.43
Protein Annotations
Gene3D:1.20.1280.50MapMan:19.2.2.8.1.4.6EnsemblPlants:CDX98047ProteinID:CDX98047ProteinID:CDX98047.1InterPro:F-box-like_dom_sf
InterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00105420001InterPro:IPR001810
PFAM:PF00646PFAM:PF14299InterPro:PP2-likePFscan:PS50181PANTHER:PTHR31960PANTHER:PTHR31960:SF2
SMART:SM00256SUPFAM:SSF81383UniParc:UPI0004EEA4BASEG:seg::
Description
BnaA06g07980D
Coordinates
chrLK031902:+:717368..718808
Molecular Weight (calculated)
32652.4 Da
IEP (calculated)
7.906
GRAVY (calculated)
-0.425
Length
287 amino acids
Sequence
(BLAST)
001: MGASHSALHK DLSSSSSSSS CLGDLPEDCV AQIVENLDPI EICRLSKLNR AFRGASWADF VWESKLPPNY EAFLERILGG FPENLQKRDI YACLCRVNSF
101: DQGTKKVWID KRSGGVCLSI SAKGLSITGI DDRRYWSHIP TDESRFASVA YLQQTWWFEV DGEIDFPFPA GTYSIFFRVQ LGQSGKWFGR RVCNTEQVHG
201: WDIKPVRFQL WTEDGQYSSS QCMLTERSRW NHYHGGEFVV RESRRSSTKI KFSMTQIDCT HTKGGLSLDS VIVYPSSCKD RLNRSPV
Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)
001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F
Arabidopsis Description
AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.