Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84551 | Canola | cytosol | 98.3 | 98.3 |
| CDX73584 | Canola | cytosol | 75.17 | 76.21 |
| VIT_08s0007g04190.t01 | Wine grape | cytosol | 76.53 | 75.25 |
| CDX78140 | Canola | cytosol | 76.19 | 74.42 |
| KRH20009 | Soybean | cytosol, plastid | 72.79 | 71.81 |
| KRH67813 | Soybean | cytosol | 71.77 | 71.53 |
| KRH32630 | Soybean | cytosol, plastid | 72.79 | 71.33 |
| GSMUA_Achr6P17110_001 | Banana | cytosol, nucleus, peroxisome | 66.33 | 65.88 |
| PGSC0003DMT400006947 | Potato | cytosol | 65.31 | 64.21 |
| PGSC0003DMT400072413 | Potato | cytosol | 63.27 | 63.7 |
| PGSC0003DMT400028899 | Potato | cytosol | 63.27 | 63.27 |
| Solyc09g008820.2.1 | Tomato | cytosol | 63.61 | 62.54 |
| Solyc10g083730.1.1 | Tomato | cytosol | 62.93 | 61.87 |
| Solyc10g085490.1.1 | Tomato | cytosol | 62.24 | 61.2 |
| CDY57080 | Canola | cytosol | 49.32 | 51.42 |
| CDX89095 | Canola | cytosol | 49.66 | 51.05 |
| CDY42484 | Canola | cytosol | 49.32 | 50.88 |
| CDX98047 | Canola | cytosol | 49.66 | 50.87 |
| CDY49201 | Canola | cytosol | 47.62 | 48.28 |
| CDY47354 | Canola | cytosol | 47.62 | 48.28 |
| CDY16361 | Canola | extracellular | 30.95 | 47.4 |
| CDY63226 | Canola | plastid | 46.6 | 47.24 |
| CDY45973 | Canola | cytosol | 46.26 | 46.9 |
| CDY38901 | Canola | cytosol | 43.54 | 46.04 |
| CDY32595 | Canola | cytosol | 44.22 | 44.98 |
| CDY09378 | Canola | cytosol | 25.85 | 28.15 |
| CDX95006 | Canola | cytosol | 25.85 | 27.34 |
| CDY70803 | Canola | cytosol | 24.49 | 27.07 |
| CDX88110 | Canola | cytosol | 11.22 | 27.05 |
| CDY71953 | Canola | cytosol | 25.51 | 26.98 |
| CDY09382 | Canola | cytosol | 24.15 | 26.69 |
| CDY03057 | Canola | cytosol | 21.43 | 26.58 |
| CDY17599 | Canola | cytosol | 25.17 | 26.15 |
| CDY63170 | Canola | cytosol | 22.11 | 26.1 |
| CDY72024 | Canola | plastid | 24.15 | 26.1 |
| CDY31110 | Canola | plastid | 23.81 | 25.93 |
| CDX87293 | Canola | cytosol | 22.11 | 25.39 |
| CDY39994 | Canola | cytosol | 22.11 | 25.39 |
| CDY17600 | Canola | cytosol | 23.81 | 24.48 |
| CDY24793 | Canola | cytosol | 11.9 | 24.14 |
| CDY38992 | Canola | cytosol | 23.13 | 24.03 |
| CDY65051 | Canola | cytosol | 18.37 | 23.89 |
| CDY09379 | Canola | cytosol | 20.07 | 23.79 |
| CDY03058 | Canola | cytosol | 23.13 | 23.78 |
| CDY54100 | Canola | cytosol | 22.79 | 23.67 |
| CDY09380 | Canola | cytosol | 25.17 | 23.34 |
| CDY17605 | Canola | cytosol | 23.13 | 23.13 |
| CDY09383 | Canola | cytosol | 23.47 | 22.7 |
| CDY09376 | Canola | cytosol | 14.97 | 22.68 |
| CDY03056 | Canola | cytosol | 11.9 | 22.29 |
| CDY17601 | Canola | cytosol | 21.77 | 21.69 |
| CDY17602 | Canola | cytosol | 22.79 | 21.47 |
| CDY03062 | Canola | cytosol | 23.13 | 21.32 |
| CDY03060 | Canola | cytosol | 23.13 | 21.12 |
| CDY15823 | Canola | cytosol | 23.47 | 20.78 |
| CDY09375 | Canola | cytosol | 20.07 | 20.21 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 14.29 | 19.44 |
| CDY03059 | Canola | cytosol | 21.77 | 19.22 |
| CDY68805 | Canola | cytosol | 10.88 | 18.5 |
| CDY65052 | Canola | cytosol | 24.83 | 16.9 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 15.65 | 14.24 |
| CDY62670 | Canola | cytosol | 1.36 | 13.79 |
Protein Annotations
| EnsemblPlants:CDX79690 | EnsemblPlantsGene:GSBRNA2T00132490001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | ncoils:Coil | PANTHER:PTHR31960 | PANTHER:PTHR31960:SF7 |
| PFAM:PF14299 | PFscan:PS50181 | ProteinID:CDX79690 | ProteinID:CDX79690.1 | SUPFAM:SSF81383 | UniParc:UPI0004EEA5AF |
| MapMan:19.2.2.8.1.4.6 | : | : | : | : | : |
Description
BnaC03g20260D
Coordinates
chrLK031818:+:1593889..1595308
Molecular Weight (calculated)
33387.8 Da
IEP (calculated)
7.914
GRAVY (calculated)
-0.361
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLSFSNLNG EHNGSSIGPS LGDIPESCVA CVILHLTPPE ICNLARLNRA FRGAASSDSV WERKLPSNYK DLLDLLPVER YRSLSKKGVF ALLSRPIPFD
101: DGNKEVWIDR VTGRVCMAVS AKGMAITGIE DRRYWNWIDT EESRFHVVAY LQQIWWFEVD GMVRFNLPPG TYCLSFRIHL GRFSKRLGRR VCHFEHTHGW
201: EIKPVRFSLS TSDGQEASCE YYLADKEGEQ AGRESWRDYK VGEFVVGCSE PTTEVQWSMK QIDCTHSKGG ICVDSVFIIP TDVKERNKRK AGVK
101: DGNKEVWIDR VTGRVCMAVS AKGMAITGIE DRRYWNWIDT EESRFHVVAY LQQIWWFEVD GMVRFNLPPG TYCLSFRIHL GRFSKRLGRR VCHFEHTHGW
201: EIKPVRFSLS TSDGQEASCE YYLADKEGEQ AGRESWRDYK VGEFVVGCSE PTTEVQWSMK QIDCTHSKGG ICVDSVFIIP TDVKERNKRK AGVK
001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA
Arabidopsis Description
PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.