Factsheet for Solyc09g008820.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006947	Potato	cytosol	97.32	97.32
Solyc10g085490.1.1	Tomato	cytosol	80.6	80.6
Solyc10g083730.1.1	Tomato	cytosol	77.59	77.59
VIT_08s0007g04190.t01	Wine grape	cytosol	72.24	72.24
KRH67813	Soybean	cytosol	68.56	69.49
KRH20009	Soybean	cytosol, plastid	68.23	68.46
KRH32630	Soybean	cytosol, plastid	68.56	68.33
AT3G53000.1	Thale cress	cytosol	66.22	66.0
CDX73584	Canola	cytosol	63.55	65.52
GSMUA_Achr6P17110_001	Banana	cytosol, nucleus, peroxisome	63.21	63.85
CDX79690	Canola	cytosol	62.54	63.61
CDX84551	Canola	cytosol	62.54	63.61
Bra006966.1-P	Field mustard	cytosol	63.88	63.46
CDX78140	Canola	cytosol	63.55	63.12
Bra023077.1-P	Field mustard	cytosol	61.87	62.93
Solyc12g056410.1.1	Tomato	cytosol, plastid	47.16	48.79
Solyc10g017960.1.1	Tomato	cytosol	47.49	48.63
Solyc01g091700.2.1	Tomato	cytosol	46.15	48.08
Solyc08g080360.2.1	Tomato	plastid	46.15	47.75
Solyc03g026160.2.1	Tomato	cytosol, extracellular	22.74	44.74
Solyc01g100010.2.1	Tomato	cytosol	24.08	25.9
Solyc01g100000.2.1	Tomato	cytosol	22.74	25.09
Solyc04g050990.2.1	Tomato	cytosol	24.41	24.58
Solyc01g099990.2.1	Tomato	cytosol	23.41	24.14
Solyc12g098190.1.1	Tomato	cytosol	20.74	23.75
Solyc05g055870.2.1	Tomato	cytosol	24.41	23.7
Solyc12g044930.1.1	Tomato	cytosol	20.74	23.66
Solyc11g006740.1.1	Tomato	cytosol	14.38	23.12
Solyc12g098200.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular	19.4	21.8
Solyc04g056680.1.1	Tomato	cytosol	11.04	18.54
Solyc10g051160.1.1	Tomato	cytosol	16.39	18.15
Solyc12g096890.1.1	Tomato	cytosol	9.36	17.5
Solyc05g053620.2.1	Tomato	cytosol	7.69	13.94

Protein Annotations

EnsemblPlants:Solyc09g008820.2.1	EnsemblPlantsGene:Solyc09g008820.2	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF7
PFAM:PF14299	PFscan:PS50181	SUPFAM:SSF81383	UniParc:UPI000276C0F7	UniProt:K4CQR7	MapMan:19.2.2.8.1.4.6

Description

No Description!

Coordinates

chr9:-:2243656..2248916

Molecular Weight (calculated)

34020.0 Da

IEP (calculated)

6.778

GRAVY (calculated)

-0.428

Length

299 amino acids

Sequence
(BLAST)

001: MGASLSSLTE NESTANGRPG LGDIPENCVA CVFMYLTPPE ICNLARLNHA FRGAASSDSV WDSKLPSNYH HLLDVLPQRI YEGFSKKDIF AFLSRPVPFD
101: DGNKEVWLDR ISGRICMSIS TKAMLITSGE DRRHWNWFPT EESRFHVVAY CQQVWWFEVS GSVKFPFPPD IYTLTFRVRL GKFYKRLGRR VCNFEHTHGW
201: DLGPVQYELF TSDGQHAVSE YSLDDSDQDD TSANLKRGDW IEYKVGEFIV SRSDPATEVR FSMKQIDCTH SKGGLCIDSV SITPSDLKAR RSKGVSKYQ

Best Arabidopsis Sequence Match ( AT3G53000.1 )
(BLAST)

001: MGSSLSNLND GTNGLAMGPG LGDIPESCVA CVFMYLTPPE ICNLAGLNRS FRGAASSDSV WEKKLPENYQ DLLDLLPPER YHSLSKKDIF AVLSRPIPFD
101: DDNKEVWIDR VTGRVCMAIS ARGMSITGIE DRRYWNWIPT EESRFHVVAY LQQIWWFEVD GTVRFHLPPG VYSLSFRIHL GRFTKRLGRR VCHFELTHGW
201: DLKPVRFSLS TSDGQEASCE YYLDDVERNE ALGKHKRGYW IEYRVGEFIV NGSEPSTEIQ WSMKQIDCTH SKGGLCVDSV FINPIGDVKE HKRKAVLKEA

Arabidopsis Description

PP2A15F-box protein PP2-A15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF92]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.