Factsheet for Solyc10g051160.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014139	Potato	cytosol	80.37	68.67
PGSC0003DMT400097622	Potato	cytosol, mitochondrion	51.11	61.61
Solyc11g006740.1.1	Tomato	cytosol	27.04	39.25
KRH55670	Soybean	cytosol	13.33	36.73
Solyc04g050990.2.1	Tomato	cytosol	37.78	34.34
Solyc01g100010.2.1	Tomato	cytosol	34.44	33.45
Solyc12g098190.1.1	Tomato	cytosol	31.85	32.95
Solyc01g099990.2.1	Tomato	cytosol	34.44	32.07
Solyc05g055870.2.1	Tomato	cytosol	36.3	31.82
Solyc12g044930.1.1	Tomato	cytosol	30.0	30.92
Solyc12g098200.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular	30.37	30.83
KRH55667	Soybean	cytosol	29.26	29.92
KRH55669	Soybean	cytosol	28.52	29.17
Solyc01g100000.2.1	Tomato	cytosol	29.26	29.15
Solyc04g056680.1.1	Tomato	cytosol	15.56	23.6
Solyc12g096890.1.1	Tomato	cytosol	13.7	23.12
Solyc08g080360.2.1	Tomato	plastid	20.37	19.03
Solyc12g056410.1.1	Tomato	cytosol, plastid	20.37	19.03
Solyc09g008820.2.1	Tomato	cytosol	18.15	16.39
Solyc10g085490.1.1	Tomato	cytosol	18.15	16.39
Solyc10g017960.1.1	Tomato	cytosol	17.41	16.1
Solyc01g091700.2.1	Tomato	cytosol	17.04	16.03
Solyc10g083730.1.1	Tomato	cytosol	17.41	15.72
Solyc05g053620.2.1	Tomato	cytosol	8.52	13.94
Solyc03g026160.2.1	Tomato	cytosol, extracellular	6.3	11.18

Protein Annotations

EnsemblPlants:Solyc10g051160.1.1	EnsemblPlantsGene:Solyc10g051160.1	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF6
PFAM:PF00646	PFAM:PF14299	SEG:seg	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI000276A6D1
UniProt:K4D0R9	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr10:+:51652262..51653304

Molecular Weight (calculated)

30353.1 Da

IEP (calculated)

5.395

GRAVY (calculated)

-0.132

Length

270 amino acids

Sequence
(BLAST)

001: MENLNRNGKY KRSVSLLSML SDDCIEEIMA LTSPLDVCHI SLVSKSLRSA ANSDSVWERF LPSDYQSIIS ASSTSVPDFA SKKDLYVYLC HHPLLIDAGH
101: KSFSLEKWTG KKCYFLGARD LDIPLVDRLS YWKWTSESRF PEVAALKRVW SLDIGGTIRA GVLSPRTSYV AYLVYIFGDE FGFSYRPSEV SVGVSSVELD
201: KRFAILVPED EESIYNLTPD LEDRLKKVYE EAVRPNLPSA GEHNDICLAL QHLPLQLLPE NVSKSLFGSA

Best Arabidopsis Sequence Match ( AT2G02240.1 )
(BLAST)

001: MCGQHYTSII SSITTEASFE RVRTHEFIKF SKHKRFDQRH RSMMGQYHSG GEIVSPGTSP FDVLPEDCIS NIISFTSPRD ACVAASVSKT FESAVSSDCV
101: WDKFLPPEYE SLVSRSRVFA SKKELYFALC HNPVLIEDGK KSFWLEKASG KRCIMLSSKE LWITWGSSPE YWQWISIPES RFNKIAELLD VCWFEIRGKT
201: SARVLSPGTR YSAYIVFKTK DRCPGLGHLP VEVGLGLVGQ ESSKRFIYFI GPRDRRGRRE TRDVTKPDQR EDGWMEAELG EFFNEERCDE IEFSVIEIKS
301: PSWKSGLIIQ GIEFRPTKSQ

Arabidopsis Description

MEE66F-box protein At2g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q3E6P4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.