CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026605.1-P	Field mustard	cytosol	83.06	78.93
CDY65051	Canola	cytosol	69.76	76.55
CDY03057	Canola	cytosol	52.82	55.27
CDY09378	Canola	cytosol	59.68	54.81
CDY09382	Canola	cytosol	57.26	53.38
CDY70803	Canola	cytosol	56.05	52.26
CDY09376	Canola	cytosol	40.73	52.06
CDY03058	Canola	cytosol	59.27	51.4
CDY17599	Canola	cytosol	58.06	50.88
CDY17600	Canola	cytosol	58.47	50.7
CDY63170	Canola	cytosol	49.6	49.4
CDY09380	Canola	cytosol	58.87	46.06
CDY09375	Canola	cytosol	52.82	44.86
CDY24793	Canola	cytosol	25.0	42.76
CDY03056	Canola	cytosol	26.21	41.4
CDY17601	Canola	cytosol	48.39	40.68
CDY17605	Canola	cytosol	47.58	40.14
CDY09383	Canola	cytosol	48.79	39.8
CDY62670	Canola	cytosol	4.44	37.93
CDX88110	Canola	cytosol	18.55	37.7
CDY03062	Canola	cytosol	48.39	37.62
VIT_00s0214g00130.t01	Wine grape	cytosol	41.94	37.55
CDY17602	Canola	cytosol	46.77	37.18
CDY68805	Canola	cytosol	25.81	36.99
CDY03060	Canola	cytosol	47.58	36.65
CDY15823	Canola	cytosol	48.79	36.45
KRG92586	Soybean	cytosol, plastid	43.15	35.31
CDY03059	Canola	cytosol	47.18	35.14
Solyc04g050990.2.1	Tomato	cytosol	40.73	34.01
VIT_00s0214g00060.t01	Wine grape	cytosol	39.11	33.8
CDY65052	Canola	cytosol	58.87	33.8
CDX87293	Canola	cytosol	34.68	33.59
CDY39994	Canola	cytosol	34.68	33.59
PGSC0003DMT400031292	Potato	cytosol	39.52	33.0
Solyc05g055870.2.1	Tomato	cytosol	40.32	32.47
PGSC0003DMT400060018	Potato	cytosol	40.73	32.27
VIT_00s0214g00150.t01	Wine grape	cytosol	39.52	32.03
KRH68844	Soybean	cytosol	40.32	31.55
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	42.74	30.37
CDY31110	Canola	plastid	33.06	30.37
CDY72024	Canola	plastid	32.66	29.78
VIT_00s0214g00090.t01	Wine grape	cytosol	39.92	29.38
CDY71953	Canola	cytosol	32.66	29.14
CDX95006	Canola	cytosol	32.26	28.78
CDY38992	Canola	cytosol	31.45	27.56
CDY54100	Canola	cytosol	31.05	27.21
CDX89095	Canola	cytosol	27.42	23.78
CDY32595	Canola	cytosol	27.42	23.53
CDY42484	Canola	cytosol	26.61	23.16
CDY38901	Canola	cytosol	25.81	23.02
CDY57080	Canola	cytosol	25.81	22.7
CDY45973	Canola	cytosol	25.81	22.07
CDY63226	Canola	plastid	25.81	22.07
CDX98047	Canola	cytosol	25.4	21.95
CDX80451	Canola	cytosol, endoplasmic reticulum, plasma membrane	18.95	21.76
CDX73584	Canola	cytosol	25.0	21.38
CDY47354	Canola	cytosol	24.6	21.03
CDX78140	Canola	cytosol	25.4	20.93
CDY49201	Canola	cytosol	24.19	20.69
CDX79690	Canola	cytosol	23.79	20.07
CDX84551	Canola	cytosol	23.39	19.73
CDY16361	Canola	extracellular	14.52	18.75
CDX95004	Canola	peroxisome, plasma membrane, vacuole	23.39	17.96

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	UniProt:A0A078F8M5	EnsemblPlants:CDY09379	ProteinID:CDY09379	ProteinID:CDY09379.1
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00030853001
InterPro:IPR001810	PFAM:PF00646	PFAM:PF14299	InterPro:PP2-like	PFscan:PS50181	PANTHER:PTHR32278
PANTHER:PTHR32278:SF6	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI0004EDBC33	:	:

Description

BnaA02g26310DBnaA02g26310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8M5]

Coordinates

chrLK031995:+:359543..362803

Molecular Weight (calculated)

28210.1 Da

IEP (calculated)

9.222

GRAVY (calculated)

-0.133

Length

248 amino acids

Sequence
(BLAST)

001: MGQKLDFGSG GKIGQERVSV SSPFDNLPDD CIANIISLTS PRDACIAASV SKTFKSTSEF NTVWEKFLPP EYSSLILGSQ VFTLKKELYL ALCNDPVLIE
101: DGQKSFWLEK ASGKRCIMLS ARQLAITWGN SPQYWQWISI PEARFKKVPE LLDVCAFEIR GWMNTRVLSP RTHYSAYVVY KTRTGCHGFR DLPIQVGIGF
201: VGEKATKRFI CFDESTDRIK FIIDITSPYW KRGLIIQGIE FRPVKKVW

Best Arabidopsis Sequence Match ( AT2G02310.1 )
(BLAST)

001: MGQKLGVDSR QKIRQVLGSS SKVQKHDVES IGGGGGEIVP GHSPFDDLPE DCISNIISFT SPRDVCVSAS VSKSFAHAVQ CDSIWEKFLP SEYESLIPPW
101: RVFSSKKDLY FTLCYDPVLV EDGKKSFWLE TASGKKCVLL AAKELWITGG NNPEYWQWIE LCESSFEKVP ELLNNRSFQM GGSMSTQILS LGTHYSVYIV
201: YKIKDERHGL RDLPIQVGVG FKGQEMPKQF ICFDESTDKT KEWPKKKLMK SKKRGDGWME AEIGDFFNDG GLMGFDEVEV SIVDVTSPNL KCGVMIEGIE
301: FRPKDCQ

Arabidopsis Description

PP2B6Putative F-box protein PP2-B6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.