Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026603.1-P | Field mustard | cytosol | 98.84 | 58.76 |
| CDY09375 | Canola | cytosol | 98.84 | 58.56 |
| CDY03056 | Canola | cytosol | 51.45 | 56.69 |
| CDY24793 | Canola | cytosol | 36.42 | 43.45 |
| CDY62670 | Canola | cytosol | 6.94 | 41.38 |
| CDY09376 | Canola | cytosol | 43.93 | 39.18 |
| CDY65051 | Canola | cytosol | 45.66 | 34.96 |
| CDY17599 | Canola | cytosol | 51.45 | 31.45 |
| CDY09378 | Canola | cytosol | 45.09 | 28.89 |
| CDY09379 | Canola | cytosol | 36.99 | 25.81 |
| CDY63170 | Canola | cytosol | 36.99 | 25.7 |
| CDY09382 | Canola | cytosol | 39.31 | 25.56 |
| CDY17605 | Canola | cytosol | 43.35 | 25.51 |
| CDY70803 | Canola | cytosol | 38.73 | 25.19 |
| CDY17600 | Canola | cytosol | 41.62 | 25.17 |
| CDY03058 | Canola | cytosol | 41.62 | 25.17 |
| CDY03057 | Canola | cytosol | 34.1 | 24.89 |
| CDY17602 | Canola | cytosol | 44.51 | 24.68 |
| CDY17601 | Canola | cytosol | 41.62 | 24.41 |
| CDY09383 | Canola | cytosol | 41.62 | 23.68 |
| CDY03062 | Canola | cytosol | 43.35 | 23.51 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 37.57 | 23.47 |
| CDY03060 | Canola | cytosol | 43.35 | 23.29 |
| CDY09380 | Canola | cytosol | 42.2 | 23.03 |
| Solyc04g050990.2.1 | Tomato | cytosol | 39.31 | 22.9 |
| KRG92586 | Soybean | cytosol, plastid | 39.88 | 22.77 |
| PGSC0003DMT400031292 | Potato | cytosol | 38.73 | 22.56 |
| CDY03059 | Canola | cytosol | 43.35 | 22.52 |
| CDY15823 | Canola | cytosol | 42.2 | 21.99 |
| CDY39994 | Canola | cytosol | 32.37 | 21.88 |
| Solyc05g055870.2.1 | Tomato | cytosol | 38.73 | 21.75 |
| PGSC0003DMT400060018 | Potato | cytosol | 39.31 | 21.73 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 35.84 | 21.6 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 38.15 | 21.57 |
| CDX87293 | Canola | cytosol | 31.79 | 21.48 |
| KRH68844 | Soybean | cytosol | 37.57 | 20.5 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 24.86 | 19.91 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 38.73 | 19.88 |
| CDY71953 | Canola | cytosol | 31.79 | 19.78 |
| CDX95006 | Canola | cytosol | 31.79 | 19.78 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 39.88 | 19.77 |
| CDY31110 | Canola | plastid | 30.64 | 19.63 |
| CDY72024 | Canola | plastid | 30.64 | 19.49 |
| CDY16361 | Canola | extracellular | 19.65 | 17.71 |
| CDY38992 | Canola | cytosol | 28.9 | 17.67 |
| CDY54100 | Canola | cytosol | 28.9 | 17.67 |
| CDY65052 | Canola | cytosol | 41.62 | 16.67 |
| CDY57080 | Canola | cytosol | 20.81 | 12.77 |
| CDX73584 | Canola | cytosol | 21.39 | 12.76 |
| CDX78140 | Canola | cytosol | 21.97 | 12.62 |
| CDY63226 | Canola | plastid | 20.23 | 12.07 |
| CDX98047 | Canola | cytosol | 19.65 | 11.85 |
| CDY49201 | Canola | cytosol | 19.65 | 11.72 |
| CDY47354 | Canola | cytosol | 19.65 | 11.72 |
| CDY45973 | Canola | cytosol | 19.65 | 11.72 |
| CDY42484 | Canola | cytosol | 18.5 | 11.23 |
| CDX89095 | Canola | cytosol | 18.5 | 11.19 |
| CDY32595 | Canola | cytosol | 18.5 | 11.07 |
| CDX84551 | Canola | cytosol | 18.5 | 10.88 |
| CDX79690 | Canola | cytosol | 18.5 | 10.88 |
| CDY38901 | Canola | cytosol | 17.34 | 10.79 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 13.87 | 7.43 |
| CDX88110 | Canola | cytosol | 4.05 | 5.74 |
Protein Annotations
| EnsemblPlants:CDY68805 | EnsemblPlantsGene:GSBRNA2T00079884001 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 | PFAM:PF14299 |
| ProteinID:CDY68805 | ProteinID:CDY68805.1 | UniParc:UPI0004EDC6FF | UniProt:A0A078JQW1 | MapMan:35.1 | : |
Description
BnaUnng03010DBnaUnng03010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQW1]
Coordinates
chrLK038030:+:597..1387
Molecular Weight (calculated)
20313.1 Da
IEP (calculated)
8.842
GRAVY (calculated)
-0.509
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSAESLYIK WINDTHCWDW ITSPGSRFER VAKVNDVCWF EIRGTINTHE LSPRTHYSSY IVFKEGFTDL PIEARVGVVG KQASKRFFCF DVSTDGQFFK
101: RGRRTWYFEK PKEREDGWRE IELGRFFNKG GLMNSDEFEM SAIATELRHW KSGFILQGIE IRPATIQRPR TVG
101: RGRRTWYFEK PKEREDGWRE IELGRFFNKG GLMNSDEFEM SAIATELRHW KSGFILQGIE IRPATIQRPR TVG
001: MLSATAMNLS SMADMSQRFL WIPCPESRFE TVAALREAYR FEFNCRMNTR VLSLRTRYSV YIVFKKADNW CGFKGVSIEA VVGIVGEESF RSFICFDTHG
101: KGQARKRKVV AKPELREDGW METEIGEFYN EGGLMSSDEV EISTVEGKYA QQKRGLVILG IEIRPAKILE EFSVCRL
101: KGQARKRKVV AKPELREDGW METEIGEFYN EGGLMSSDEV EISTVEGKYA QQKRGLVILG IEIRPAKILE EFSVCRL
Arabidopsis Description
SKIP3F-box protein SKIP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FV02]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.