Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71953 | Canola | cytosol | 93.17 | 93.17 |
| CDY72024 | Canola | plastid | 79.5 | 81.25 |
| CDY31110 | Canola | plastid | 78.78 | 81.11 |
| AT1G09155.1 | Thale cress | cytosol | 78.42 | 75.43 |
| CDY54100 | Canola | cytosol | 66.19 | 65.02 |
| CDY38992 | Canola | cytosol | 65.83 | 64.66 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 49.28 | 48.07 |
| KRH33867 | Soybean | cytosol | 43.53 | 45.83 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 47.48 | 45.83 |
| KRH68480 | Soybean | cytosol | 46.04 | 44.6 |
| KRG96762 | Soybean | cytosol | 45.68 | 44.25 |
| Solyc01g100000.2.1 | Tomato | cytosol | 42.09 | 43.17 |
| PGSC0003DMT400063744 | Potato | cytosol | 42.81 | 42.2 |
| Solyc01g100010.2.1 | Tomato | cytosol | 41.37 | 41.37 |
| CDY17599 | Canola | cytosol | 39.57 | 38.87 |
| CDY62670 | Canola | cytosol | 3.96 | 37.93 |
| CDY24793 | Canola | cytosol | 19.42 | 37.24 |
| CDX87293 | Canola | cytosol | 33.81 | 36.72 |
| CDY39994 | Canola | cytosol | 33.81 | 36.72 |
| CDY09378 | Canola | cytosol | 34.89 | 35.93 |
| CDY03057 | Canola | cytosol | 30.58 | 35.87 |
| CDY17605 | Canola | cytosol | 37.05 | 35.03 |
| CDY03056 | Canola | cytosol | 19.78 | 35.03 |
| CDY17600 | Canola | cytosol | 35.97 | 34.97 |
| CDY09382 | Canola | cytosol | 33.45 | 34.96 |
| CDY63170 | Canola | cytosol | 31.3 | 34.94 |
| CDY03058 | Canola | cytosol | 35.61 | 34.62 |
| CDY09383 | Canola | cytosol | 37.77 | 34.54 |
| CDX88110 | Canola | cytosol | 15.11 | 34.43 |
| CDY70803 | Canola | cytosol | 32.73 | 34.21 |
| CDY65051 | Canola | cytosol | 26.62 | 32.74 |
| CDY17602 | Canola | cytosol | 36.69 | 32.69 |
| CDY03062 | Canola | cytosol | 37.41 | 32.6 |
| CDY09379 | Canola | cytosol | 28.78 | 32.26 |
| CDY17601 | Canola | cytosol | 34.17 | 32.2 |
| CDY03060 | Canola | cytosol | 37.05 | 31.99 |
| CDY09380 | Canola | cytosol | 36.33 | 31.86 |
| CDY09375 | Canola | cytosol | 33.45 | 31.85 |
| CDY68805 | Canola | cytosol | 19.78 | 31.79 |
| CDY09376 | Canola | cytosol | 21.94 | 31.44 |
| CDY15823 | Canola | cytosol | 37.05 | 31.02 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 23.74 | 30.56 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 34.89 | 30.03 |
| CDY03059 | Canola | cytosol | 35.25 | 29.43 |
| CDY57080 | Canola | cytosol | 26.62 | 26.24 |
| CDX79690 | Canola | cytosol | 27.34 | 25.85 |
| CDX84551 | Canola | cytosol | 26.98 | 25.51 |
| CDX98047 | Canola | cytosol | 26.26 | 25.44 |
| CDY42484 | Canola | cytosol | 25.9 | 25.26 |
| CDX89095 | Canola | cytosol | 25.9 | 25.17 |
| CDX73584 | Canola | cytosol | 26.26 | 25.17 |
| CDX78140 | Canola | cytosol | 26.26 | 24.25 |
| CDY63226 | Canola | plastid | 24.82 | 23.79 |
| CDY38901 | Canola | cytosol | 23.74 | 23.74 |
| CDY32595 | Canola | cytosol | 24.46 | 23.53 |
| CDY45973 | Canola | cytosol | 24.1 | 23.1 |
| CDY65052 | Canola | cytosol | 35.61 | 22.92 |
| CDY49201 | Canola | cytosol | 23.74 | 22.76 |
| CDY47354 | Canola | cytosol | 23.74 | 22.76 |
| CDY16361 | Canola | extracellular | 15.47 | 22.4 |
Protein Annotations
| EnsemblPlants:CDX95006 | EnsemblPlantsGene:GSBRNA2T00100519001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF15 | PFAM:PF14299 | ProteinID:CDX95006 | ProteinID:CDX95006.1 |
| SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0004EDDE15 | MapMan:35.1 | : | : |
Description
BnaC05g06650D
Coordinates
chrLK031886:+:658258..659293
Molecular Weight (calculated)
31675.0 Da
IEP (calculated)
7.777
GRAVY (calculated)
-0.338
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKIEERIVM LPEACVANIL SFTTPADTFS SASVSSVFRV AGDSDFVWEK FLPSDYSRLI STSTHKSFSS KKELYRCLCE SILIDNGRKI FKIEKLTGKI
101: SYVLSARDIS ITWSDQRHYW CWSHRSDSRF SEGARLIMTD WLEIIGKIQS GVLSPSTSYG AYLVMKVTER AYGLDLVPAE TWLKVGNGEK KTKTSYLSCL
201: GNKKQQMAKK DEIFGYYRRE PEMREDGWME IELGEFETGR EGNEEVVMSL TEVRGYQLKG GIVLDGIEVR PKPQKLSC
101: SYVLSARDIS ITWSDQRHYW CWSHRSDSRF SEGARLIMTD WLEIIGKIQS GVLSPSTSYG AYLVMKVTER AYGLDLVPAE TWLKVGNGEK KTKTSYLSCL
201: GNKKQQMAKK DEIFGYYRRE PEMREDGWME IELGEFETGR EGNEEVVMSL TEVRGYQLKG GIVLDGIEVR PKPQKLSC
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.