Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018579.1-P | Field mustard | cytosol | 99.64 | 99.64 |
| CDX95006 | Canola | cytosol | 93.17 | 93.17 |
| CDY72024 | Canola | plastid | 80.58 | 82.35 |
| CDY31110 | Canola | plastid | 79.86 | 82.22 |
| AT1G09155.1 | Thale cress | cytosol | 79.86 | 76.82 |
| CDY54100 | Canola | cytosol | 66.91 | 65.72 |
| CDY38992 | Canola | cytosol | 66.55 | 65.37 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 52.16 | 50.88 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 50.36 | 48.61 |
| KRH33867 | Soybean | cytosol | 45.68 | 48.11 |
| Solyc01g100000.2.1 | Tomato | cytosol | 45.32 | 46.49 |
| KRH68480 | Soybean | cytosol | 47.84 | 46.34 |
| KRG96762 | Soybean | cytosol | 47.48 | 45.99 |
| PGSC0003DMT400063744 | Potato | cytosol | 44.96 | 44.33 |
| Solyc01g100010.2.1 | Tomato | cytosol | 43.53 | 43.53 |
| CDY17599 | Canola | cytosol | 38.85 | 38.16 |
| CDY24793 | Canola | cytosol | 19.42 | 37.24 |
| CDY39994 | Canola | cytosol | 34.17 | 37.11 |
| CDX87293 | Canola | cytosol | 34.17 | 37.11 |
| CDY09378 | Canola | cytosol | 35.97 | 37.04 |
| CDX88110 | Canola | cytosol | 15.83 | 36.07 |
| CDY09382 | Canola | cytosol | 34.17 | 35.71 |
| CDY03056 | Canola | cytosol | 20.14 | 35.67 |
| CDY03057 | Canola | cytosol | 30.22 | 35.44 |
| CDY63170 | Canola | cytosol | 31.65 | 35.34 |
| CDY17600 | Canola | cytosol | 36.33 | 35.31 |
| CDY03058 | Canola | cytosol | 35.97 | 34.97 |
| CDY70803 | Canola | cytosol | 33.45 | 34.96 |
| CDY62670 | Canola | cytosol | 3.6 | 34.48 |
| CDY17605 | Canola | cytosol | 36.33 | 34.35 |
| CDY65051 | Canola | cytosol | 27.7 | 34.07 |
| CDY09383 | Canola | cytosol | 36.33 | 33.22 |
| CDY09376 | Canola | cytosol | 23.02 | 32.99 |
| CDY09379 | Canola | cytosol | 29.14 | 32.66 |
| CDY09380 | Canola | cytosol | 36.33 | 31.86 |
| CDY68805 | Canola | cytosol | 19.78 | 31.79 |
| CDY17602 | Canola | cytosol | 35.61 | 31.73 |
| CDY17601 | Canola | cytosol | 33.45 | 31.53 |
| CDY09375 | Canola | cytosol | 33.09 | 31.51 |
| CDY03062 | Canola | cytosol | 35.97 | 31.35 |
| CDY03060 | Canola | cytosol | 35.97 | 31.06 |
| CDX95004 | Canola | peroxisome, plasma membrane, vacuole | 34.89 | 30.03 |
| CDY15823 | Canola | cytosol | 35.61 | 29.82 |
| CDY03059 | Canola | cytosol | 34.53 | 28.83 |
| CDX80451 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 22.3 | 28.7 |
| CDY57080 | Canola | cytosol | 26.62 | 26.24 |
| CDY42484 | Canola | cytosol | 26.26 | 25.61 |
| CDX89095 | Canola | cytosol | 26.26 | 25.52 |
| CDX79690 | Canola | cytosol | 26.98 | 25.51 |
| CDX98047 | Canola | cytosol | 26.26 | 25.44 |
| CDX84551 | Canola | cytosol | 26.62 | 25.17 |
| CDX73584 | Canola | cytosol | 25.9 | 24.83 |
| CDY63226 | Canola | plastid | 25.54 | 24.48 |
| CDY16361 | Canola | extracellular | 16.55 | 23.96 |
| CDX78140 | Canola | cytosol | 25.9 | 23.92 |
| CDY45973 | Canola | cytosol | 24.82 | 23.79 |
| CDY49201 | Canola | cytosol | 24.1 | 23.1 |
| CDY47354 | Canola | cytosol | 24.1 | 23.1 |
| CDY38901 | Canola | cytosol | 23.02 | 23.02 |
| CDY65052 | Canola | cytosol | 35.61 | 22.92 |
| CDY32595 | Canola | cytosol | 23.74 | 22.84 |
Protein Annotations
| EnsemblPlants:CDY71953 | EnsemblPlantsGene:GSBRNA2T00022682001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF15 | PFAM:PF14299 | ProteinID:CDY71953 | ProteinID:CDY71953.1 |
| SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0004EF4CC4 | UniProt:A0A078JWC2 | MapMan:35.1 | : |
Description
BnaAnng39370DBnaAnng39370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWC2]
Coordinates
chrLK048249:-:786..1798
Molecular Weight (calculated)
31679.9 Da
IEP (calculated)
5.874
GRAVY (calculated)
-0.337
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKIEERIMM LPEACVANIL SFTTPADTFS SASVSSVFRV AGDSDFVWEK FLPSDYSRLI SSSTHQSFSS KKELFRCLCE SILIDNGRKI FKIEKLTGKI
101: SFVLSARELS ITWSDQRHYW SWSHRSDSRF SEGARLIMTD WLEIIGKIQT GALSPSTSYG AYLIMKVTER AYGLDLVPAE TWIKVGNGEN KTKTSYLSCL
201: DDKKQQMAKK EEIFGYYRRE PEMREDGWME IELGEFETGR EGNEEVVMSL TEVKGYQLKG GIVIDGIEVR PKSQKLSC
101: SFVLSARELS ITWSDQRHYW SWSHRSDSRF SEGARLIMTD WLEIIGKIQT GALSPSTSYG AYLIMKVTER AYGLDLVPAE TWIKVGNGEN KTKTSYLSCL
201: DDKKQQMAKK EEIFGYYRRE PEMREDGWME IELGEFETGR EGNEEVVMSL TEVKGYQLKG GIVIDGIEVR PKSQKLSC
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.