Factsheet for TraesCS5B01G313700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G319500.1	Wheat	cytosol	98.26	98.61
TraesCS5A01G312700.1	Wheat	cytosol	97.57	97.91
HORVU5Hr1G080530.1	Barley	cytosol	96.88	97.21
Os09t0525300-01	Rice	cytosol	80.56	82.56
Zm00001d021224_P001	Maize	cytosol	79.86	77.7
EER99217	Sorghum	cytosol	79.86	76.92
GSMUA_Achr7P05860_001	Banana	cytosol	64.93	64.48
GSMUA_Achr3P12400_001	Banana	cytosol	63.19	63.19
Zm00001d024256_P001	Maize	cytosol, mitochondrion	51.39	59.44
VIT_15s0048g01930.t01	Wine grape	cytosol	57.64	57.44
KRH03980	Soybean	cytosol, plastid	56.94	57.34
CDY42484	Canola	cytosol	56.6	57.19
Bra014456.1-P	Field mustard	cytosol	56.6	56.99
CDX89095	Canola	cytosol	56.6	56.99
VIT_16s0100g00520.t01	Wine grape	cytosol	54.86	56.63
AT3G61060.2	Thale cress	cytosol	56.94	56.36
GSMUA_Achr11P...	Banana	cytosol	35.07	55.8
TraesCS2B01G418200.2	Wheat	cytosol	58.68	55.78
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	57.99	55.67
Zm00001d035636_P001	Maize	plastid	49.65	54.79
TraesCS6B01G269300.1	Wheat	cytosol	56.25	54.36
Solyc08g080360.2.1	Tomato	plastid	54.51	54.33
Solyc10g017960.1.1	Tomato	cytosol	54.86	54.11
KRH65151	Soybean	cytosol	52.78	54.09
PGSC0003DMT400058590	Potato	plastid	54.17	53.98
CDY16361	Canola	extracellular	35.76	53.65
KRH38594	Soybean	cytosol	53.82	53.63
CDY57080	Canola	cytosol	52.43	53.55
KRH48244	Soybean	cytosol	52.08	53.38
Solyc12g056410.1.1	Tomato	cytosol, plastid	53.47	53.29
KRH09123	Soybean	cytosol	53.12	52.94
PGSC0003DMT400010881	Potato	plastid	53.12	52.94
Bra019781.1-P	Field mustard	cytosol	52.08	52.26
KRG91447	Soybean	cytosol, plastid	53.12	52.22
PGSC0003DMT400026564	Potato	cytosol	53.47	52.2
Solyc03g026160.2.1	Tomato	cytosol, extracellular	27.43	51.97
CDX98047	Canola	cytosol	51.74	51.92
VIT_02s0025g04380.t01	Wine grape	cytosol	55.56	51.78
PGSC0003DMT400071397	Potato	cytosol	51.74	51.74
KRH35368	Soybean	cytosol	53.47	51.68
Solyc01g091700.2.1	Tomato	cytosol	51.39	51.57
TraesCS4B01G356300.1	Wheat	cytosol	54.51	51.14
CDY38901	Canola	cytosol	49.31	51.08
CDY32595	Canola	cytosol	50.35	50.17
AT5G52120.1	Thale cress	cytosol	50.35	49.83
Bra029137.1-P	Field mustard	cytosol	50.0	49.66
Bra027618.1-P	Field mustard	cytosol	50.0	49.66
CDY63226	Canola	plastid	50.0	49.66
CDY49201	Canola	cytosol	50.0	49.66
CDY47354	Canola	cytosol	50.0	49.66
CDY45973	Canola	cytosol	50.0	49.66
Bra027000.1-P	Field mustard	cytosol	49.65	49.31
AT1G63090.1	Thale cress	cytosol	49.31	49.13
KRH57251	Soybean	plastid	56.25	47.51
PGSC0003DMT400037131	Potato	cytosol	47.92	46.62
AT1G12710.2	Thale cress	cytosol	52.78	45.65
TraesCS4B01G262300.1	Wheat	cytosol	25.35	27.65
TraesCS6B01G423500.1	Wheat	cytosol	25.69	24.92
TraesCS7B01G205100.1	Wheat	cytosol	24.31	23.57
TraesCS6B01G423200.1	Wheat	cytosol	24.65	23.51
TraesCS6B01G421100.1	Wheat	cytosol	25.0	22.78
TraesCS5B01G558800.1	Wheat	nucleus	22.92	22.45
TraesCS6B01G423400.1	Wheat	cytosol	24.31	22.29
TraesCS6B01G422300.1	Wheat	cytosol	22.57	21.96
TraesCS3B01G094500.1	Wheat	cytosol	23.26	21.9
TraesCS6B01G422400.1	Wheat	cytosol	22.57	21.81
TraesCS3B01G018900.1	Wheat	cytosol	22.22	21.33
TraesCS5B01G559800.1	Wheat	cytosol	21.53	20.53
TraesCS7B01G449100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.53	20.13
TraesCS5B01G558600.1	Wheat	cytosol	19.1	20.07
TraesCS5B01G560000.1	Wheat	cytosol	21.53	19.75
TraesCS5B01G560100.1	Wheat	cytosol	21.18	19.49
TraesCS7B01G448100.1	Wheat	cytosol, extracellular	20.14	18.41
TraesCS3B01G097600.1	Wheat	cytosol	17.01	17.69
TraesCS6B01G422200.1	Wheat	mitochondrion	13.19	15.77

Protein Annotations

EnsemblPlants:TraesCS5B01G313700.1	EnsemblPlantsGene:TraesCS5B01G313700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR31960	PANTHER:PTHR31960:SF9	PFAM:PF14299
PFscan:PS50181	SEG:seg	SUPFAM:SSF81383	MapMan:19.2.2.8.1.4.6	:	:

Description

No Description!

Coordinates

chr5B:+:496263515..496265399

Molecular Weight (calculated)

31972.2 Da

IEP (calculated)

8.875

GRAVY (calculated)

-0.309

Length

288 amino acids

Sequence
(BLAST)

001: MGAVGSSARR GGGTALGDLP ENCVAEVMLR LNPTEICGMA RLSRTFRGAA SGDAVWEAKL PRNYARLLAA AGGGDEEAAA LEAEAIPKKE VYARLSRRNS
101: LDGGTKEFWL DKAGGGTCMT IYSRALSITG IDDRRYWNFI PNDESRFRSV AYLSQIWWFE VRGEVEFCFP EGTYSLFFRI HLGRPFKRLG RRVYSAEHIH
201: GWDVKPVRFQ LSTSDGQQAQ SKCYLTDPGV WIYHHVGDFV VKDSNGPLNI KFAMVQIDCT HTKGGLCMDS VVIKPKCLAR KKGPGSYE

Best Arabidopsis Sequence Match ( AT1G12710.1 )
(BLAST)

001: MGVAHSDLHN DLSSSSCFGD RNILKPGLGD LPEACVAIIV ENLDPVEICR FSKLNRAFRG ASWADCVWES KLPQNYRDVL EKILGGFPEN LQKRHLYAFL
101: SRINSFDDAT KKVWIDKRTS GVCLSISAKG LSITGIDDRR YWSHIPTDES RFSSVAYLQQ IWWFEVDGEI DFPFPVGTYS IFFRLQLGRS GKWFGRRVCN
201: TEQVHGWDIK PVRFQLWTED GQYSSSQCML TERGNWIHYH AGDVVVRESN RSSTKIKFSM TQIDCTHTKG GLSLDSVVVY PSSCKDQLKR F

Arabidopsis Description

AtPP2-A12phloem protein 2-A12 [Source:TAIR;Acc:AT1G12710]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.