Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 51.58 | 95.32 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 94.62 | 94.03 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 93.99 | 93.99 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 92.09 | 91.8 |
| Os02t0812500-01 | Rice | cytosol | 70.89 | 67.47 |
| Zm00001d051936_P001 | Maize | cytosol | 66.77 | 67.41 |
| EES05994 | Sorghum | cytosol | 70.89 | 66.27 |
| Zm00001d018451_P001 | Maize | cytosol | 68.04 | 62.5 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 42.09 | 51.35 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 41.77 | 51.16 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 42.09 | 48.19 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 39.24 | 46.97 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 38.29 | 45.32 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 41.77 | 44.44 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 42.41 | 44.37 |
| AT1G80110.1 | Thale cress | cytosol | 34.81 | 42.8 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 38.29 | 42.46 |
| Bra035198.1-P | Field mustard | cytosol | 34.18 | 42.19 |
| CDX87293 | Canola | cytosol | 34.18 | 42.19 |
| KRH33867 | Soybean | cytosol | 35.13 | 42.05 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 41.77 | 42.04 |
| CDY39994 | Canola | cytosol | 33.54 | 41.41 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 37.66 | 41.32 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 35.44 | 40.43 |
| TraesCS5B01G558800.1 | Wheat | nucleus | 37.34 | 40.14 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 37.34 | 39.86 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 37.03 | 39.39 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 33.86 | 39.05 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 34.49 | 38.79 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 36.39 | 38.33 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 35.76 | 37.92 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 36.71 | 37.91 |
| PGSC0003DMT400063740 | Potato | cytosol | 34.18 | 37.63 |
| PGSC0003DMT400063744 | Potato | cytosol | 33.54 | 37.59 |
| TraesCS5B01G559800.1 | Wheat | cytosol | 35.76 | 37.42 |
| TraesCS5B01G560100.1 | Wheat | cytosol | 37.03 | 37.38 |
| Solyc01g100010.2.1 | Tomato | cytosol | 32.59 | 37.05 |
| KRH68480 | Soybean | cytosol | 33.54 | 36.93 |
| Solyc01g099990.2.1 | Tomato | cytosol | 33.54 | 36.55 |
| KRG96762 | Soybean | cytosol | 32.91 | 36.24 |
| Solyc01g100000.2.1 | Tomato | cytosol | 30.7 | 35.79 |
| TraesCS5B01G560000.1 | Wheat | cytosol | 35.44 | 35.67 |
| KRH68481 | Soybean | cytosol | 17.09 | 34.18 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.28 | 33.12 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 27.85 | 31.77 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 23.42 | 30.71 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 30.38 | 30.48 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 22.78 | 25.0 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 22.78 | 24.0 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 21.52 | 22.44 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 21.52 | 22.15 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 20.57 | 21.81 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G421100.1 | EnsemblPlantsGene:TraesCS6B01G421100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:692036555..692038185
Molecular Weight (calculated)
34948.3 Da
IEP (calculated)
5.012
GRAVY (calculated)
-0.296
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCAAAAAAI YRLPEECVAH AIAMTTPGDA LSSSAVSPAF RAAADSDAVW DRFLPRDHAD VLARADDAGD HRECSMSNKE LFTRLCSRPV LDGATMSFGL
101: DRRSGAKCWM LSARALSIVW GDDPSCWTWT ADLPGSRFPE VAELVDVCWL EITGKLQLSL LTPRTTYAAY LVYAIADDSY GLECNIGILP PKATVTVVVS
201: GNSTKPTSTA TSTSTENTIC LQHMQGEEET TMHRRRQEYV RPRNNYGWKL VREADMDIRC PRRRGDDGWT EVELGEFAVA GEEDGVVEVS LKEVECRRWK
301: RGLIVQGIEI RPKHTN
101: DRRSGAKCWM LSARALSIVW GDDPSCWTWT ADLPGSRFPE VAELVDVCWL EITGKLQLSL LTPRTTYAAY LVYAIADDSY GLECNIGILP PKATVTVVVS
201: GNSTKPTSTA TSTSTENTIC LQHMQGEEET TMHRRRQEYV RPRNNYGWKL VREADMDIRC PRRRGDDGWT EVELGEFAVA GEEDGVVEVS LKEVECRRWK
301: RGLIVQGIEI RPKHTN
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.