Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G421100.1 | Wheat | cytosol | 93.99 | 93.99 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 50.63 | 93.57 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 92.72 | 92.14 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 91.14 | 90.85 |
| Os02t0812500-01 | Rice | cytosol | 70.25 | 66.87 |
| Zm00001d051936_P001 | Maize | cytosol | 65.51 | 66.13 |
| EES05994 | Sorghum | cytosol | 69.62 | 65.09 |
| Zm00001d018451_P001 | Maize | cytosol | 66.14 | 60.76 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 41.14 | 50.39 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 40.82 | 49.81 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 41.46 | 47.46 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 37.97 | 45.8 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 37.97 | 44.94 |
| AT1G80110.1 | Thale cress | cytosol | 34.81 | 42.8 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 40.19 | 42.76 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 39.87 | 42.42 |
| Bra035198.1-P | Field mustard | cytosol | 33.86 | 41.8 |
| CDX87293 | Canola | cytosol | 33.86 | 41.8 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 37.66 | 41.75 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 41.46 | 41.59 |
| KRH33867 | Soybean | cytosol | 34.49 | 41.29 |
| CDY39994 | Canola | cytosol | 33.23 | 41.02 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 37.34 | 40.97 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 37.34 | 40.83 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 35.44 | 40.43 |
| TraesCS7A01G063400.1 | Wheat | cytosol | 16.14 | 40.16 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 32.28 | 39.84 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 35.13 | 39.5 |
| TraesCS4A01G041300.1 | Wheat | plastid | 39.56 | 39.06 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 36.71 | 39.06 |
| PGSC0003DMT400063744 | Potato | cytosol | 34.49 | 38.65 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 38.92 | 38.44 |
| Solyc01g100010.2.1 | Tomato | cytosol | 33.54 | 38.13 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 12.97 | 37.96 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 36.39 | 37.7 |
| PGSC0003DMT400063740 | Potato | cytosol | 34.18 | 37.63 |
| TraesCS7A01G063500.1 | Wheat | cytosol | 14.24 | 37.19 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 16.46 | 36.62 |
| Solyc01g099990.2.1 | Tomato | cytosol | 33.54 | 36.55 |
| KRH68480 | Soybean | cytosol | 32.91 | 36.24 |
| Solyc01g100000.2.1 | Tomato | cytosol | 30.7 | 35.79 |
| KRG96762 | Soybean | cytosol | 32.28 | 35.54 |
| KRH68481 | Soybean | cytosol | 16.77 | 33.54 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 32.28 | 32.38 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 30.7 | 28.28 |
| TraesCS3A01G082500.1 | Wheat | plastid | 18.35 | 27.62 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 22.78 | 25.09 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 21.84 | 22.7 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 21.84 | 22.55 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 20.89 | 22.15 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 19.94 | 21.14 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G381900.1 | EnsemblPlantsGene:TraesCS6A01G381900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:601231095..601233447
Molecular Weight (calculated)
34933.5 Da
IEP (calculated)
4.702
GRAVY (calculated)
-0.207
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCAAAAAAI YRLPEECVAH AIAMTTPGDA LSSSAVSPAF RAAADSDAVW DCFLPRDHAA VLTRADDDDC RECSMSKKEL FTCLCSRPVL LDGATMSFGL
101: DRRSGAKCWM LSARALSIVW ADDPSCWTWT ADLPGSRFPE VAELVDVCWL EITGKLQLSL LTPQTTYAAY LVYAIADDSY GLECNIGILP PKGTVTVVVS
201: GSGTKPTLTA VSTSTENTIC LQHMQGEEET AMHRRRQEYV RPRKNYGWKL VREADMDIRC PRRRGDDGWT EVELGEFAVD DEEDGVVEVS LKEVECRRWK
301: RGLIVQGIEI RPKHTN
101: DRRSGAKCWM LSARALSIVW ADDPSCWTWT ADLPGSRFPE VAELVDVCWL EITGKLQLSL LTPQTTYAAY LVYAIADDSY GLECNIGILP PKGTVTVVVS
201: GSGTKPTLTA VSTSTENTIC LQHMQGEEET AMHRRRQEYV RPRKNYGWKL VREADMDIRC PRRRGDDGWT EVELGEFAVD DEEDGVVEVS LKEVECRRWK
301: RGLIVQGIEI RPKHTN
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.