Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G369200.1 | Wheat | cytosol | 92.93 | 93.56 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 83.84 | 83.84 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 79.8 | 75.24 |
| Os02t0813350-01 | Rice | cytosol | 66.67 | 66.67 |
| EES05998 | Sorghum | cytosol | 60.27 | 64.39 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 56.23 | 63.74 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 63.64 | 62.58 |
| TraesCS7A01G063400.1 | Wheat | cytosol | 26.26 | 61.42 |
| EES05996 | Sorghum | cytosol | 54.21 | 57.71 |
| TraesCS7A01G063500.1 | Wheat | cytosol | 22.9 | 56.2 |
| TraesCS4A01G041300.1 | Wheat | plastid | 59.93 | 55.62 |
| Os02t0813166-00 | Rice | cytosol, plastid | 48.82 | 55.34 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 19.87 | 54.63 |
| OQU85929 | Sorghum | cytosol | 52.19 | 54.39 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 46.46 | 53.7 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 45.79 | 53.12 |
| Os02t0813083-00 | Rice | extracellular | 19.53 | 50.88 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 24.24 | 45.0 |
| CDY39994 | Canola | cytosol | 38.05 | 44.14 |
| Bra035198.1-P | Field mustard | cytosol | 37.71 | 43.75 |
| CDX87293 | Canola | cytosol | 37.71 | 43.75 |
| AT1G80110.1 | Thale cress | cytosol | 36.7 | 42.41 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 40.4 | 42.11 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 38.72 | 41.52 |
| KRH33867 | Soybean | cytosol | 36.03 | 40.53 |
| TraesCS3A01G082500.1 | Wheat | plastid | 28.62 | 40.48 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 42.76 | 40.19 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 39.06 | 40.14 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 38.72 | 39.93 |
| PGSC0003DMT400063740 | Potato | cytosol | 37.71 | 39.02 |
| Solyc01g099990.2.1 | Tomato | cytosol | 37.71 | 38.62 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 38.05 | 38.05 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 40.07 | 37.19 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 37.71 | 36.72 |
| KRH68480 | Soybean | cytosol | 34.34 | 35.54 |
| Solyc01g100000.2.1 | Tomato | cytosol | 31.99 | 35.06 |
| KRG96762 | Soybean | cytosol | 33.67 | 34.84 |
| Solyc01g100010.2.1 | Tomato | cytosol | 32.32 | 34.53 |
| PGSC0003DMT400063744 | Potato | cytosol | 32.66 | 34.4 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 16.16 | 33.8 |
| KRH68481 | Soybean | cytosol | 17.85 | 33.54 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 31.65 | 29.84 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 30.3 | 26.24 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 23.23 | 24.04 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 22.56 | 22.04 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 21.89 | 21.81 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 21.89 | 21.24 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 20.54 | 20.47 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G384100.1 | EnsemblPlantsGene:TraesCS6A01G384100 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF2 |
| PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6A:-:602739013..602740569
Molecular Weight (calculated)
32792.4 Da
IEP (calculated)
4.421
GRAVY (calculated)
-0.410
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEACEIARL PEELLSAALA RTSPRDACRA AAISPAFRAA ADSDAVWAGF LPPGGLPPLA DGELAAPAPP SSKKELFLRL SAGPALLQDK LVSVWVDRET
101: GAKCYMLSAR NLFIVWGNTP EYWTWIPLQD SRFSEGAQLR HVCWLEIRGK IHSNLLSLDT TYTAYMVFKK TDDFYGLAFP VQEASVSVGA TNLTRKVCLQ
201: HNNDDDDGDG DNDDDDDYDD CGMPENYWSM RRNGLHKENV ALPQQRTDGW MELELGEFFN EGGEDGEVSI SLTEAKGGNW KSGLIVQGIE IRRKKSG
101: GAKCYMLSAR NLFIVWGNTP EYWTWIPLQD SRFSEGAQLR HVCWLEIRGK IHSNLLSLDT TYTAYMVFKK TDDFYGLAFP VQEASVSVGA TNLTRKVCLQ
201: HNNDDDDGDG DNDDDDDYDD CGMPENYWSM RRNGLHKENV ALPQQRTDGW MELELGEFFN EGGEDGEVSI SLTEAKGGNW KSGLIVQGIE IRRKKSG
001: MTKTRCMHEH FRKIVQRVKK TLRLSASDKS HGVAELDDLP EECVSIIVSF TSPQDACVLA SVSKTFASAV KSDIVWEKFI PPEYESLISQ SRAFKFLSKK
101: ELYFALCDKS VLIDDGKKSL WIEKANAKRC IMISAMNLAI AWGNSPQSWR WIPDPQARFE TVAELLEVCL FEIRGRINSR VISPKTRYSA YIVYKKLNIC
201: YGFENVAVEV VVGVVGQDLE ESCRRYICFD ETMDEQFRRR DRGKNLVKPE RRKDGWMEIK IGEFFNEGGL LNDDEIEMVA LEAKQRHWKR GLIIQGIEIR
301: PTNIR
101: ELYFALCDKS VLIDDGKKSL WIEKANAKRC IMISAMNLAI AWGNSPQSWR WIPDPQARFE TVAELLEVCL FEIRGRINSR VISPKTRYSA YIVYKKLNIC
201: YGFENVAVEV VVGVVGQDLE ESCRRYICFD ETMDEQFRRR DRGKNLVKPE RRKDGWMEIK IGEFFNEGGL LNDDEIEMVA LEAKQRHWKR GLIIQGIEIR
301: PTNIR
Arabidopsis Description
PP2B8Putative F-box protein PP2-B8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.