Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G558600.1 | Wheat | cytosol | 95.7 | 89.42 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 59.38 | 50.16 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 55.86 | 48.15 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 46.88 | 45.8 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 53.12 | 45.79 |
| Os02t0813350-01 | Rice | cytosol | 51.56 | 44.44 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 53.12 | 43.17 |
| EES05998 | Sorghum | cytosol | 46.88 | 43.17 |
| TraesCS7A01G063400.1 | Wheat | cytosol | 21.09 | 42.52 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 48.83 | 41.39 |
| EES05996 | Sorghum | cytosol | 43.75 | 40.14 |
| Os02t0813166-00 | Rice | cytosol, plastid | 41.02 | 40.08 |
| OQU85929 | Sorghum | cytosol | 43.75 | 39.3 |
| CDY39994 | Canola | cytosol | 37.5 | 37.5 |
| Bra035198.1-P | Field mustard | cytosol | 36.72 | 36.72 |
| CDX87293 | Canola | cytosol | 36.72 | 36.72 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 36.72 | 36.58 |
| TraesCS4A01G041300.1 | Wheat | plastid | 45.31 | 36.25 |
| Os02t0813083-00 | Rice | extracellular | 16.02 | 35.96 |
| AT1G80110.1 | Thale cress | cytosol | 35.94 | 35.8 |
| KRH33867 | Soybean | cytosol | 36.33 | 35.23 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 21.48 | 34.38 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 37.11 | 34.3 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 37.89 | 33.68 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 37.89 | 33.56 |
| TraesCS7A01G063500.1 | Wheat | cytosol | 15.62 | 33.06 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 36.72 | 32.98 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 38.67 | 32.46 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 13.67 | 32.41 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 39.84 | 32.28 |
| PGSC0003DMT400063740 | Potato | cytosol | 35.94 | 32.06 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 37.11 | 31.99 |
| Solyc01g099990.2.1 | Tomato | cytosol | 35.94 | 31.72 |
| TraesCS3A01G082500.1 | Wheat | plastid | 25.0 | 30.48 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 37.89 | 30.31 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 16.41 | 29.58 |
| PGSC0003DMT400063744 | Potato | cytosol | 32.42 | 29.43 |
| KRH68480 | Soybean | cytosol | 32.81 | 29.27 |
| KRG96762 | Soybean | cytosol | 32.81 | 29.27 |
| Solyc01g100010.2.1 | Tomato | cytosol | 31.64 | 29.14 |
| Solyc01g100000.2.1 | Tomato | cytosol | 28.91 | 27.31 |
| KRH68481 | Soybean | cytosol | 16.8 | 27.22 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 29.69 | 24.13 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 28.52 | 21.28 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 21.88 | 19.51 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 21.88 | 18.79 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 21.48 | 18.09 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 20.31 | 17.45 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 20.7 | 17.32 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G320400.1 | EnsemblPlantsGene:TraesCS4A01G320400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PFAM:PF14299 | PFscan:PS50181 |
| SEG:seg | SUPFAM:SSF81383 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:608881132..608882197
Molecular Weight (calculated)
28879.7 Da
IEP (calculated)
6.252
GRAVY (calculated)
-0.232
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLPAELVS AAFAGTTPRD AGRAAMVSTA FRAAADSDIV WARFLPPLEP LAPEPQSKKD MFLRLLDGPV LLRDRLMTMW LDRETFAKCY MLSARNLFIA
101: SGHMPQHWSW IPLSDSMFSE GAQLNSVTWL EIRGGIHTDM LTPDSKYGAY LVFKRTQNFS GFNYPIQKAT LYFGQIMEYT SPVLLGENWT PPPELGVAQP
201: QRRADGWMEI SLGHFHTSGN ELYAEMSFSL METEGEVTQK RGLIVHGIEI RREKSG
101: SGHMPQHWSW IPLSDSMFSE GAQLNSVTWL EIRGGIHTDM LTPDSKYGAY LVFKRTQNFS GFNYPIQKAT LYFGQIMEYT SPVLLGENWT PPPELGVAQP
201: QRRADGWMEI SLGHFHTSGN ELYAEMSFSL METEGEVTQK RGLIVHGIEI RREKSG
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.