Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G079700.1 | Wheat | cytosol | 88.52 | 90.91 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 89.84 | 89.54 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 85.9 | 83.97 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 79.02 | 81.14 |
| TraesCS7A01G371000.1 | Wheat | cytosol | 65.9 | 69.55 |
| Os08t0150700-01 | Rice | cytosol | 63.93 | 65.22 |
| Zm00001d024621_P001 | Maize | cytosol | 59.02 | 58.63 |
| Zm00001d032787_P001 | Maize | cytosol | 54.1 | 56.12 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 36.07 | 42.64 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 35.74 | 42.08 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 37.05 | 40.94 |
| OQU92610 | Sorghum | mitochondrion | 49.51 | 40.48 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 34.75 | 39.7 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 38.36 | 39.39 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 32.46 | 38.67 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 32.79 | 38.17 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 36.72 | 37.71 |
| TraesCS7A01G063400.1 | Wheat | cytosol | 15.41 | 37.01 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 34.43 | 36.84 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 34.75 | 36.81 |
| KRH33867 | Soybean | cytosol | 31.8 | 36.74 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 37.7 | 36.39 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 33.11 | 35.94 |
| CDX87293 | Canola | cytosol | 30.16 | 35.94 |
| Bra035198.1-P | Field mustard | cytosol | 30.16 | 35.94 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 37.7 | 35.94 |
| CDY39994 | Canola | cytosol | 29.84 | 35.55 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 16.39 | 35.21 |
| AT1G80110.1 | Thale cress | cytosol | 29.51 | 35.02 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 31.8 | 35.02 |
| PGSC0003DMT400063740 | Potato | cytosol | 32.46 | 34.49 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 35.08 | 33.97 |
| Solyc01g099990.2.1 | Tomato | cytosol | 31.8 | 33.45 |
| Solyc01g100000.2.1 | Tomato | cytosol | 29.51 | 33.21 |
| KRG96762 | Soybean | cytosol | 30.49 | 32.4 |
| KRH68480 | Soybean | cytosol | 30.49 | 32.4 |
| PGSC0003DMT400063744 | Potato | cytosol | 29.84 | 32.27 |
| Solyc01g100010.2.1 | Tomato | cytosol | 29.18 | 32.01 |
| TraesCS4A01G041300.1 | Wheat | plastid | 33.11 | 31.56 |
| KRH68481 | Soybean | cytosol | 16.07 | 31.01 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 30.82 | 29.84 |
| TraesCS7A01G063500.1 | Wheat | cytosol | 11.8 | 29.75 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 10.16 | 28.7 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 30.49 | 27.11 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 23.61 | 23.53 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 21.97 | 23.34 |
| TraesCS3A01G082500.1 | Wheat | plastid | 16.07 | 23.33 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 22.95 | 23.03 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 20.98 | 21.48 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 20.98 | 21.48 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G079300.1 | EnsemblPlantsGene:TraesCS3A01G079300 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 |
| PFAM:PF00646 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3A:+:51381593..51383638
Molecular Weight (calculated)
32656.7 Da
IEP (calculated)
6.046
GRAVY (calculated)
-0.067
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLGAGMAT AAATEEDTTR LCDLPEACVA YVLALTSPRD ACRCAAVSPC FRDAAESDVV WARFLPPDYR AILQLHQAPA RSLPLSRSGS TAGAASPSGS
101: SKKEAFLGLT DAAVLVDGGG MAVWLARGSG AKCVALSARR LSLPWEDGEF SWRWTPHRLS RFADVAQLED YTCLDIYGRL PTAALTPATA YAAYLVFVTT
201: DAHRGLSFPD QETTISVGGS APSRHTVCLR PDAAEARRFR GGKGTDGVDV RGPALRGDGW WEIEMGRLRT GNEAVAGEEV AVSFEMLGWY HKRGLVVEGV
301: EFRPL
101: SKKEAFLGLT DAAVLVDGGG MAVWLARGSG AKCVALSARR LSLPWEDGEF SWRWTPHRLS RFADVAQLED YTCLDIYGRL PTAALTPATA YAAYLVFVTT
201: DAHRGLSFPD QETTISVGGS APSRHTVCLR PDAAEARRFR GGKGTDGVDV RGPALRGDGW WEIEMGRLRT GNEAVAGEEV AVSFEMLGWY HKRGLVVEGV
301: EFRPL
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.