Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G079300.1 | Wheat | cytosol | 90.91 | 88.52 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 88.22 | 85.62 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 86.53 | 82.37 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 80.47 | 80.2 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 64.31 | 66.32 |
| Os08t0150700-01 | Rice | cytosol | 62.63 | 62.21 |
| Zm00001d024621_P001 | Maize | cytosol | 59.26 | 57.33 |
| Zm00001d032787_P001 | Maize | cytosol | 56.23 | 56.8 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 37.04 | 42.64 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 37.04 | 42.47 |
| OQU92610 | Sorghum | mitochondrion | 50.84 | 40.48 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 37.37 | 40.22 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 34.68 | 38.58 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 38.38 | 38.38 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 38.05 | 38.31 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 33.67 | 37.74 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 35.69 | 36.81 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 35.02 | 36.49 |
| KRH33867 | Soybean | cytosol | 32.32 | 36.36 |
| Bra035198.1-P | Field mustard | cytosol | 31.31 | 36.33 |
| CDX87293 | Canola | cytosol | 31.31 | 36.33 |
| CDY39994 | Canola | cytosol | 30.98 | 35.94 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 38.38 | 35.85 |
| AT1G80110.1 | Thale cress | cytosol | 30.98 | 35.8 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 33.33 | 35.23 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 30.64 | 34.73 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 32.32 | 34.66 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 16.5 | 34.27 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 35.35 | 34.2 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 36.03 | 34.19 |
| PGSC0003DMT400063740 | Potato | cytosol | 33.0 | 34.15 |
| Solyc01g100000.2.1 | Tomato | cytosol | 30.64 | 33.58 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 35.02 | 33.44 |
| Solyc01g099990.2.1 | Tomato | cytosol | 32.32 | 33.1 |
| KRH68480 | Soybean | cytosol | 30.98 | 32.06 |
| KRG96762 | Soybean | cytosol | 30.98 | 32.06 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 33.0 | 31.92 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 35.35 | 31.25 |
| PGSC0003DMT400063744 | Potato | cytosol | 29.29 | 30.85 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 31.99 | 30.84 |
| Solyc01g100010.2.1 | Tomato | cytosol | 28.62 | 30.58 |
| KRH68481 | Soybean | cytosol | 16.16 | 30.38 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 27.27 | 28.12 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 29.63 | 27.67 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 26.6 | 26.33 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 27.27 | 26.21 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 22.22 | 22.0 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 21.21 | 21.95 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 21.89 | 21.17 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 20.2 | 20.13 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 19.87 | 19.8 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 28.96 | 15.36 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G079700.1 | EnsemblPlantsGene:TraesCS3D01G079700 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 |
| PFAM:PF00646 | PFAM:PF14299 | SEG:seg | SMART:SM00256 | SUPFAM:SSF81383 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3D:+:39588890..39591169
Molecular Weight (calculated)
32235.6 Da
IEP (calculated)
6.764
GRAVY (calculated)
-0.049
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMATAATEE DRTRLCDLPE ACVAHVLALT SPRDACRCAA VSPCFRDAAE SDVIWARFLP LDYRAILQLH QAPARRLPLS RSGSMAASPS GSSKKEAFLG
101: LTDVAVLVED GGMAVWLARG SGAKCVALSA RRLSLPWEDG EFSWRWTPHP LSRFADVAQL VDCMCLDIYG RLPTTALTPA TAYATYLVFA TTDAHRGLSF
201: PDQETTVSLG GSAPSRHTVC IRPDTAEARR FRGGKGAHGV DVRGPVLRGD GWWEIEMGRL RTGNEAVVGE EVAVSFEMLG WYPKRGLVVE GVEFRPL
101: LTDVAVLVED GGMAVWLARG SGAKCVALSA RRLSLPWEDG EFSWRWTPHP LSRFADVAQL VDCMCLDIYG RLPTTALTPA TAYATYLVFA TTDAHRGLSF
201: PDQETTVSLG GSAPSRHTVC IRPDTAEARR FRGGKGAHGV DVRGPVLRGD GWWEIEMGRL RTGNEAVVGE EVAVSFEMLG WYPKRGLVVE GVEFRPL
001: MIQSTMGHKQ SVDSRGKGRK VPGSSSMVQK HRVESSGGAI ISGPSLFDNL PEDCISNIIS FTSPRDACVA ASVSKTFESA VNSDSVWDKF LPSDYSSLVP
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
Arabidopsis Description
PP2B2Putative F-box protein PP2-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.