Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G367900.1 | Wheat | cytosol | 36.43 | 70.83 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 34.46 | 62.46 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 32.86 | 61.33 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 28.39 | 51.79 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 21.25 | 45.42 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 21.25 | 44.91 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 23.57 | 44.44 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 22.86 | 43.39 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 22.86 | 41.69 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 23.04 | 41.21 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 22.32 | 37.2 |
| Bra035198.1-P | Field mustard | cytosol | 16.96 | 37.11 |
| CDY39994 | Canola | cytosol | 16.96 | 37.11 |
| CDX87293 | Canola | cytosol | 16.96 | 37.11 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 9.29 | 36.36 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 17.5 | 35.38 |
| AT1G80110.1 | Thale cress | cytosol | 16.07 | 35.02 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 17.14 | 33.33 |
| KRH33867 | Soybean | cytosol | 15.71 | 33.33 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 16.79 | 32.98 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 18.39 | 32.39 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 17.86 | 32.15 |
| PGSC0003DMT400063740 | Potato | cytosol | 16.07 | 31.36 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 8.93 | 31.25 |
| KRH68481 | Soybean | cytosol | 8.75 | 31.01 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 15.89 | 30.9 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 16.07 | 30.2 |
| Solyc01g099990.2.1 | Tomato | cytosol | 15.54 | 30.0 |
| Solyc01g100000.2.1 | Tomato | cytosol | 14.46 | 29.89 |
| Solyc01g100010.2.1 | Tomato | cytosol | 14.46 | 29.14 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 15.36 | 28.96 |
| PGSC0003DMT400063744 | Potato | cytosol | 14.46 | 28.72 |
| KRG96762 | Soybean | cytosol | 14.46 | 28.22 |
| KRH68480 | Soybean | cytosol | 14.46 | 28.22 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 15.0 | 26.42 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 14.46 | 26.3 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 11.07 | 21.6 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 10.36 | 19.46 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 9.82 | 18.33 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 10.0 | 18.24 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 9.64 | 18.12 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G368100.1 | EnsemblPlantsGene:TraesCS6D01G368100 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF13 |
| PFAM:PF12937 | PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SMART:SM00256 | SUPFAM:SSF81383 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:455495988..455505312
Molecular Weight (calculated)
62439.9 Da
IEP (calculated)
9.355
GRAVY (calculated)
-0.368
Length
560 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLPEELLV RVVSLTSPLD ACRAAAVSRA FRAAADSDAV WSFFLPRNLP RFAKGELPRT QPSSKKELFR RLSDQPALLP HKLVSMQLDK ATGAQCFTIS
101: ARALLIPRCK GSHRVSLCAL SNCSKQDKRF FSEDARFYRI NELEIRGKIQ TKMLSQSTTY AVYLVFKLAY VYNEFDFPYE VASVGVAGRE STRQVCVQGC
201: RGSLSCDANP PREEVHFPHE KDDGWMEVEL GEFRNEECDG GDEVSISFMG ESKSGLTVLG IELRTTPLLP EDLLVHVISL TSPADAFRAT AVSRAFHAAA
301: DSDTVWSRLL PRDLLQFARR EIPRKPPSTK KGMFRRLSGE PALLPAKYVR MQLDKATGAK CFTLSASALQ ANDSHTPLIR VGTVPGYSKR GKRFSEAGEL
401: GYGILKIRAK IQKNMLSQNT TYVAYMVLKL GPRFHGFDFP FQEASFGVAG SESVRKVCLQ GYVEDADKAD DPPRKHIMPS YYLNRDAVPP GDDVVFPRKT
501: ADDWMEVEFG EFHNKGGDGD VSISLTETTE PKSGLIVWGI VIRSKQTNQK KKKEVSKKGK
101: ARALLIPRCK GSHRVSLCAL SNCSKQDKRF FSEDARFYRI NELEIRGKIQ TKMLSQSTTY AVYLVFKLAY VYNEFDFPYE VASVGVAGRE STRQVCVQGC
201: RGSLSCDANP PREEVHFPHE KDDGWMEVEL GEFRNEECDG GDEVSISFMG ESKSGLTVLG IELRTTPLLP EDLLVHVISL TSPADAFRAT AVSRAFHAAA
301: DSDTVWSRLL PRDLLQFARR EIPRKPPSTK KGMFRRLSGE PALLPAKYVR MQLDKATGAK CFTLSASALQ ANDSHTPLIR VGTVPGYSKR GKRFSEAGEL
401: GYGILKIRAK IQKNMLSQNT TYVAYMVLKL GPRFHGFDFP FQEASFGVAG SESVRKVCLQ GYVEDADKAD DPPRKHIMPS YYLNRDAVPP GDDVVFPRKT
501: ADDWMEVEFG EFHNKGGDGD VSISLTETTE PKSGLIVWGI VIRSKQTNQK KKKEVSKKGK
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.