Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G262300.1 | Wheat | cytosol | 57.74 | 73.21 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 52.98 | 67.94 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 55.65 | 63.39 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 54.76 | 61.95 |
| Os02t0813350-01 | Rice | cytosol | 51.49 | 58.25 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 52.98 | 57.98 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 53.27 | 57.19 |
| EES05998 | Sorghum | cytosol | 46.73 | 56.47 |
| Os02t0813166-00 | Rice | cytosol, plastid | 42.56 | 54.58 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 48.81 | 54.3 |
| EES05996 | Sorghum | cytosol | 44.94 | 54.12 |
| OQU85929 | Sorghum | cytosol | 43.45 | 51.23 |
| OQU85933 | Sorghum | cytosol, mitochondrion | 38.39 | 50.19 |
| Os02t0813083-00 | Rice | extracellular | 16.96 | 50.0 |
| TraesCS6D01G368000.1 | Wheat | cytosol | 45.24 | 49.51 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 21.13 | 44.38 |
| Bra035198.1-P | Field mustard | cytosol | 33.63 | 44.14 |
| CDX87293 | Canola | cytosol | 33.63 | 44.14 |
| CDY39994 | Canola | cytosol | 33.33 | 43.75 |
| AT1G80110.1 | Thale cress | cytosol | 31.85 | 41.63 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 34.23 | 39.93 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 36.61 | 39.55 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 36.31 | 39.48 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 33.33 | 39.3 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 34.82 | 39.0 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 36.61 | 38.68 |
| KRH33867 | Soybean | cytosol | 30.36 | 38.64 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 31.25 | 37.91 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 32.14 | 37.5 |
| PGSC0003DMT400063740 | Potato | cytosol | 31.55 | 36.93 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 31.55 | 36.81 |
| Solyc01g099990.2.1 | Tomato | cytosol | 31.25 | 36.21 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 15.18 | 35.66 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 31.55 | 35.57 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 31.25 | 35.35 |
| KRH68480 | Soybean | cytosol | 29.76 | 34.84 |
| KRG96762 | Soybean | cytosol | 28.87 | 33.8 |
| PGSC0003DMT400063744 | Potato | cytosol | 27.98 | 33.33 |
| Solyc01g100010.2.1 | Tomato | cytosol | 27.38 | 33.09 |
| Solyc01g100000.2.1 | Tomato | cytosol | 26.49 | 32.84 |
| KRH68481 | Soybean | cytosol | 14.88 | 31.65 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 27.68 | 30.19 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 27.08 | 28.62 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 20.54 | 24.04 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 37.2 | 22.32 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 19.35 | 21.81 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 19.05 | 21.33 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 19.05 | 20.85 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 18.15 | 20.47 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G035000.1 | EnsemblPlantsGene:TraesCS5D01G035000 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF13 |
| PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SUPFAM:SSF81383 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5D:+:34063620..34065344
Molecular Weight (calculated)
36786.9 Da
IEP (calculated)
7.107
GRAVY (calculated)
-0.250
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWKGGFQVL RRLLQLEPRG STEPRAEDEE APTATGETCE IARLPEELLS VALSLTAPRD ACRAAAVSPA FRAAADSDAV WACFLPSARD LPPLADGEPP
101: PRSKKDLFRR LSGSPILLPG GLVVRKAGVY GGARAGIWLV ANQPCVRVQS MWLDRETGAK CYMVAARELY ICWGDTPQYW TWIPLADARF SESAQLRQVC
201: WLDICGNIHS NMLTPGSAYA AYMVYKLADD SYGLDSPAQA SVSIGGINRS TRKVSLQLHA GSGQQRSTRR NRRRAVEDAV LPCKRADGWV ELELGEFFCE
301: GGEDGDVSFG LAETQELGWK SGLIVQGIEI RRKKLG
101: PRSKKDLFRR LSGSPILLPG GLVVRKAGVY GGARAGIWLV ANQPCVRVQS MWLDRETGAK CYMVAARELY ICWGDTPQYW TWIPLADARF SESAQLRQVC
201: WLDICGNIHS NMLTPGSAYA AYMVYKLADD SYGLDSPAQA SVSIGGINRS TRKVSLQLHA GSGQQRSTRR NRRRAVEDAV LPCKRADGWV ELELGEFFCE
301: GGEDGDVSFG LAETQELGWK SGLIVQGIEI RRKKLG
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.