Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G422300.1 | Wheat | cytosol | 81.11 | 84.12 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 76.87 | 79.19 |
| TraesCS4D01G262300.1 | Wheat | cytosol | 46.91 | 54.34 |
| TraesCS6D01G043900.1 | Wheat | cytosol | 52.77 | 54.0 |
| TraesCS3D01G083600.1 | Wheat | cytosol | 53.42 | 53.07 |
| TraesCS6D01G369100.1 | Wheat | cytosol | 49.84 | 51.52 |
| TraesCS6D01G369200.1 | Wheat | cytosol | 48.86 | 50.85 |
| TraesCS6D01G367900.1 | Wheat | cytosol | 47.56 | 50.69 |
| TraesCS7D01G058100.1 | Wheat | cytosol | 43.0 | 50.38 |
| TraesCS6D01G368900.1 | Wheat | cytosol | 46.58 | 46.58 |
| TraesCS6D01G369000.1 | Wheat | cytosol | 46.25 | 45.37 |
| TraesCS5D01G035000.1 | Wheat | cytosol, mitochondrion | 49.51 | 45.24 |
| GSMUA_Achr5P10170_001 | Banana | cytosol | 22.48 | 43.12 |
| Bra035198.1-P | Field mustard | cytosol | 35.5 | 42.58 |
| CDX87293 | Canola | cytosol | 35.5 | 42.58 |
| AT1G80110.1 | Thale cress | cytosol | 35.18 | 42.02 |
| CDY39994 | Canola | cytosol | 34.85 | 41.8 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 34.53 | 38.27 |
| KRH33867 | Soybean | cytosol | 32.9 | 38.26 |
| TraesCS5D01G566000.2 | Wheat | cytosol | 38.44 | 37.94 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 17.59 | 37.76 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 34.53 | 37.19 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 34.85 | 37.15 |
| PGSC0003DMT400063740 | Potato | cytosol | 34.2 | 36.59 |
| TraesCS6D01G366600.1 | Wheat | cytosol | 37.78 | 36.48 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 33.88 | 36.11 |
| Solyc01g099990.2.1 | Tomato | cytosol | 33.55 | 35.52 |
| Solyc01g100010.2.1 | Tomato | cytosol | 31.6 | 34.89 |
| PGSC0003DMT400063744 | Potato | cytosol | 31.92 | 34.75 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 32.9 | 33.89 |
| KRH68480 | Soybean | cytosol | 31.27 | 33.45 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 31.92 | 33.0 |
| Solyc01g100000.2.1 | Tomato | cytosol | 28.99 | 32.84 |
| KRG96762 | Soybean | cytosol | 30.62 | 32.75 |
| KRH68481 | Soybean | cytosol | 16.61 | 32.28 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.62 | 30.52 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 31.6 | 30.5 |
| TraesCS6D01G368100.1 | Wheat | cytosol | 51.79 | 28.39 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 20.52 | 21.95 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 19.87 | 20.47 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 19.54 | 19.54 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 18.89 | 19.46 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 18.89 | 19.33 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G368000.1 | EnsemblPlantsGene:TraesCS6D01G368000 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF13 |
| PFAM:PF12937 | PFAM:PF14299 | PFscan:PS50181 | SUPFAM:SSF81383 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6D:-:455453752..455454901
Molecular Weight (calculated)
34709.9 Da
IEP (calculated)
8.204
GRAVY (calculated)
-0.175
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MCDVTIYVTS TVSSLVEADG NEIWRLPEEL LASIISLTSP PDAGRCAAVS RAFLAAADSD AVWSCFLPHD LPQFAQGVLR RAPPSKKGLF RCLSDQPALL
101: PGKLVSMRLD RATGAKCYML SARSLHISWG ETRQYWEWIK LRSHRFSEAA QLRGVWWLLI RGKIHSTMLC RNSKYAAYMV FKLADEFTKL DFPFQEASIS
201: VGGNDSSTRQ VCLQAYMEDG DDGVPRKHIL RSSWEIRLPR MKRRAIRLTD DVMLPRKRAD GWMEVELGEF YNGEGCDGDM FVTLMETEAG VFKSGLIVWG
301: IEIRTKQ
101: PGKLVSMRLD RATGAKCYML SARSLHISWG ETRQYWEWIK LRSHRFSEAA QLRGVWWLLI RGKIHSTMLC RNSKYAAYMV FKLADEFTKL DFPFQEASIS
201: VGGNDSSTRQ VCLQAYMEDG DDGVPRKHIL RSSWEIRLPR MKRRAIRLTD DVMLPRKRAD GWMEVELGEF YNGEGCDGDM FVTLMETEAG VFKSGLIVWG
301: IEIRTKQ
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.