Factsheet for Zm00001d018452_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85933	Sorghum	cytosol, mitochondrion	59.93	70.43
TraesCS6B01G423500.1	Wheat	cytosol	66.56	67.68
TraesCS6D01G369100.1	Wheat	cytosol	66.56	67.68
TraesCS6A01G384000.2	Wheat	cytosol	66.23	67.34
Os02t0813350-01	Rice	cytosol	64.24	65.32
TraesCS6D01G369200.1	Wheat	cytosol	62.91	64.41
TraesCS6A01G384100.1	Wheat	cytosol	62.58	63.64
TraesCS6B01G423200.1	Wheat	cytosol	62.58	62.58
TraesCS4D01G262300.1	Wheat	cytosol	53.97	61.51
TraesCS6D01G368900.1	Wheat	cytosol	61.92	60.91
TraesCS4B01G262300.1	Wheat	cytosol	52.98	60.61
TraesCS6A01G383900.1	Wheat	cytosol	62.58	60.0
TraesCS6D01G369000.1	Wheat	cytosol	61.92	59.74
TraesCS6B01G423400.1	Wheat	cytosol	61.59	59.24
TraesCS7A01G063600.1	Wheat	cytosol, nucleus, peroxisome	50.99	58.78
HORVU2Hr1G104500.6	Barley	cytosol	50.0	57.63
HORVU6Hr1G090000.1	Barley	cytosol, plastid	64.24	57.4
TraesCS7D01G058100.1	Wheat	cytosol	49.01	56.49
HORVU7Hr1G012610.1	Barley	cytosol	53.64	54.92
Os02t0813166-00	Rice	cytosol, plastid	46.69	53.82
Os02t0813083-00	Rice	extracellular	19.87	52.63
HORVU6Hr1G090010.2	Barley	cytosol, nucleus, plastid	57.95	51.47
TraesCS4A01G041300.1	Wheat	plastid	53.97	50.94
TraesCSU01G197600.1	Wheat	cytosol, mitochondrion	52.98	50.0
TraesCSU01G190600.1	Wheat	cytosol, mitochondrion	52.98	50.0
TraesCS4A01G320400.1	Wheat	cytosol	41.39	48.83
TraesCS5D01G035000.1	Wheat	cytosol, mitochondrion	54.3	48.81
Zm00001d053172_P001	Maize	cytosol	46.03	46.96
TraesCS7A01G063200.1	Wheat	cytosol	16.56	46.3
TraesCS5B01G558600.1	Wheat	cytosol	41.72	45.99
GSMUA_Achr5P10170_001	Banana	cytosol	23.51	44.38
HORVU5Hr1G124090.2	Barley	cytosol	43.38	43.23
Bra035198.1-P	Field mustard	cytosol	35.1	41.41
CDX87293	Canola	cytosol	35.1	41.41
CDY39994	Canola	cytosol	34.77	41.02
AT1G80110.1	Thale cress	cytosol	34.77	40.86
KRH33867	Soybean	cytosol	35.1	40.15
VIT_14s0060g01990.t01	Wine grape	cytosol	35.43	38.63
VIT_14s0060g02020.t01	Wine grape	cytosol	36.42	38.6
Zm00001d051936_P001	Maize	cytosol	39.74	38.34
Zm00001d032787_P001	Maize	cytosol	36.76	37.76
VIT_14s0060g02000.t01	Wine grape	cytosol	35.43	37.15
Zm00001d018451_P001	Maize	cytosol	41.72	36.63
Zm00001d024621_P001	Maize	cytosol	36.76	36.16
PGSC0003DMT400063740	Potato	cytosol	34.11	35.89
KRH68480	Soybean	cytosol	33.77	35.54
KRG96762	Soybean	cytosol	33.77	35.54
Solyc01g099990.2.1	Tomato	cytosol	34.11	35.52
PGSC0003DMT400063744	Potato	cytosol	31.79	34.04
Solyc01g100010.2.1	Tomato	cytosol	31.13	33.81
Solyc01g100000.2.1	Tomato	cytosol	28.81	32.1
KRH68481	Soybean	cytosol	16.23	31.01
Zm00001d029673_P001	Maize	plasma membrane	23.84	24.32
Zm00001d027361_P001	Maize	cytosol	23.84	24.16
Zm00001d021224_P001	Maize	cytosol	23.51	23.99
Zm00001d021854_P001	Maize	cytosol	6.95	23.86
Zm00001d051447_P002	Maize	cytosol	21.52	21.96
Zm00001d024256_P001	Maize	cytosol, mitochondrion	17.88	21.69
Zm00001d026078_P001	Maize	cytosol	20.53	21.45
Zm00001d035636_P001	Maize	plastid	17.22	19.92

Protein Annotations

EnsemblPlants:Zm00001d018452_P001	EnsemblPlants:Zm00001d018452_T001	EnsemblPlantsGene:Zm00001d018452	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF13	PFAM:PF14299	ProteinID:AQK76033.1
SEG:seg	SUPFAM:SSF81383	UniParc:UPI0002207730	UniProt:A0A1D6HP31	MapMan:35.1	:

Description

F-box protein PP2-B10

Coordinates

chr5:+:221122059..221123875

Molecular Weight (calculated)

33492.9 Da

IEP (calculated)

4.981

GRAVY (calculated)

-0.329

Length

302 amino acids

Sequence
(BLAST)

001: MESTAAPAAC EIARLPDDLL SAALGRTGPL DACRAAAVSP AFRAAADADA VWSSFLPPDL PPLADGELPA DATATKKQLF MRLSDPARPV LLADGLTSMW
101: LDRATVAKCY MLSARKLTII WGDTPQYWRW IPLTDSRFSE CAELQHVCWL EIRGKIPCDM LSRNTTYAAY MVFKMSDESY GLDYPLQEAE VSIGATRSTR
201: QVCLGYVDDD EDGEEVPQNY RSFGAVGTVF RPRIGRRNRR QPPGVHVLHP QTRAGGWMEM EMGEFRNEEG EDGEVSVSLM ETRGGNWKRG LTVQGIEIRV
301: KK

Best Arabidopsis Sequence Match ( AT2G02230.1 )
(BLAST)

001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN

Arabidopsis Description

PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.