Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G371000.1 | Wheat | cytosol | 57.48 | 58.48 |
| Zm00001d024621_P001 | Maize | cytosol | 60.88 | 58.31 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 56.8 | 56.8 |
| Os08t0150700-01 | Rice | cytosol | 57.48 | 56.52 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 55.1 | 56.25 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 56.8 | 56.23 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 56.8 | 56.04 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 56.46 | 55.89 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 55.44 | 54.88 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 56.12 | 54.1 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 56.46 | 53.21 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 54.76 | 52.61 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 55.1 | 49.85 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 39.12 | 44.4 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 37.76 | 43.02 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 37.41 | 39.86 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 35.71 | 39.33 |
| Zm00001d018452_P001 | Maize | cytosol, extracellular | 37.76 | 36.76 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 34.35 | 35.94 |
| KRH33867 | Soybean | cytosol | 31.29 | 34.85 |
| Bra035198.1-P | Field mustard | cytosol | 30.27 | 34.77 |
| CDX87293 | Canola | cytosol | 30.27 | 34.77 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 33.67 | 34.74 |
| AT1G80110.1 | Thale cress | cytosol | 30.27 | 34.63 |
| CDY39994 | Canola | cytosol | 29.93 | 34.38 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 31.29 | 33.21 |
| Zm00001d053172_P001 | Maize | cytosol | 33.33 | 33.11 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 32.31 | 32.99 |
| Zm00001d051936_P001 | Maize | cytosol | 34.69 | 32.59 |
| PGSC0003DMT400063744 | Potato | cytosol | 29.93 | 31.21 |
| Solyc01g099990.2.1 | Tomato | cytosol | 30.61 | 31.03 |
| PGSC0003DMT400063740 | Potato | cytosol | 30.27 | 31.01 |
| Solyc01g100010.2.1 | Tomato | cytosol | 29.25 | 30.94 |
| Zm00001d018451_P001 | Maize | cytosol | 36.05 | 30.81 |
| KRH68480 | Soybean | cytosol | 29.59 | 30.31 |
| KRG96762 | Soybean | cytosol | 28.91 | 29.62 |
| Solyc01g100000.2.1 | Tomato | cytosol | 26.87 | 29.15 |
| KRH68481 | Soybean | cytosol | 15.31 | 28.48 |
| Zm00001d021854_P001 | Maize | cytosol | 6.8 | 22.73 |
| Zm00001d024256_P001 | Maize | cytosol, mitochondrion | 17.35 | 20.48 |
| Zm00001d021224_P001 | Maize | cytosol | 20.41 | 20.27 |
| Zm00001d029673_P001 | Maize | plasma membrane | 20.41 | 20.27 |
| Zm00001d027361_P001 | Maize | cytosol | 20.41 | 20.13 |
| Zm00001d051447_P002 | Maize | cytosol | 18.71 | 18.58 |
| Zm00001d035636_P001 | Maize | plastid | 16.33 | 18.39 |
| Zm00001d026078_P001 | Maize | cytosol | 17.35 | 17.65 |
Protein Annotations
| EnsemblPlants:Zm00001d032787_P001 | EnsemblPlants:Zm00001d032787_T001 | EnsemblPlantsGene:Zm00001d032787 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0030246 | InterPro:F-box-like_dom_sf | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 | PFAM:PF14299 |
| ProteinID:ONM06051.1 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0008448DCE | UniProt:A0A1D6KTZ0 | MapMan:35.1 |
Description
Phloem-specific lectin
Coordinates
chr1:-:238154586..238161375
Molecular Weight (calculated)
32228.9 Da
IEP (calculated)
5.806
GRAVY (calculated)
-0.292
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEETRAGD LPEPCLAHAI ALTSPRDACR CAAVSPAFRA AADSDYVWGR FVPEDHRRAI ALHLHDAGRD RGPRKDAYLA LCDGGGGGVP VDVDGDGWCR
101: LWLDQASGAK CYALSARRLS LPWEDGDFCW RWAPHARSRF GEVAELMDCS YLDIYGRLPV AVLTRATSYA AYLVYGIAEG HRGLSFPDQE AAVSLGGRVP
201: AESHHRRSVC LRPDEAEARK FWGAGAVIPY GVGGVHVPRL RDDGWWEVEM GRLRTVEAGE HEAPGEDVVA SFEVVGSYPK RGLILEGIEF RKLQ
101: LWLDQASGAK CYALSARRLS LPWEDGDFCW RWAPHARSRF GEVAELMDCS YLDIYGRLPV AVLTRATSYA AYLVYGIAEG HRGLSFPDQE AAVSLGGRVP
201: AESHHRRSVC LRPDEAEARK FWGAGAVIPY GVGGVHVPRL RDDGWWEVEM GRLRTVEAGE HEAPGEDVVA SFEVVGSYPK RGLILEGIEF RKLQ
001: MGRKRRVKSE SSPFDSFPED CISYIISFTN PRDACVAATV SKTFESTVKS DIIWEKFLPA DYESLIPPSR VFSSKKELYF SLCNDPVLFD DDKKSVWLEK
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
101: ASGKRCLMLS AMNLSIIWGD NPQYWQWIPI PESRFEKVAK LRDVCWFEIR GRTNTRVLSP RTRYSAYIVF KGVDKCYGFQ NVAIEAAVGV VGQEPSRRLI
201: CFSEAIRRGR RNVVKPKQRE DGWMEIELGE FFNDGGIMDN DEIEMSALET KQLNRKCGLI IQGIEIRPAK IL
Arabidopsis Description
PP2B10F-box protein PP2-B10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.