Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G351500.1 | Wheat | cytosol | 93.08 | 93.4 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 92.39 | 82.15 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 68.17 | 66.33 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 69.55 | 65.9 |
| Os08t0150700-01 | Rice | cytosol | 68.17 | 65.89 |
| Zm00001d032787_P001 | Maize | cytosol | 58.48 | 57.48 |
| Zm00001d024621_P001 | Maize | cytosol | 60.9 | 57.33 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 41.18 | 45.95 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 40.48 | 45.35 |
| OQU92610 | Sorghum | mitochondrion | 56.06 | 43.43 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 40.83 | 42.75 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 37.72 | 40.82 |
| TraesCS6A01G384000.2 | Wheat | cytosol | 40.48 | 39.39 |
| TraesCS7A01G063400.1 | Wheat | cytosol | 17.3 | 39.37 |
| TraesCS6A01G384100.1 | Wheat | cytosol | 40.14 | 39.06 |
| TraesCS7A01G063600.1 | Wheat | cytosol, nucleus, peroxisome | 35.29 | 38.93 |
| TraesCS4A01G320400.1 | Wheat | cytosol | 33.56 | 37.89 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 36.33 | 37.37 |
| TraesCS6A01G381900.1 | Wheat | cytosol | 40.83 | 37.34 |
| TraesCS6A01G383900.1 | Wheat | cytosol | 40.14 | 36.83 |
| Bra035198.1-P | Field mustard | cytosol | 32.18 | 36.33 |
| CDX87293 | Canola | cytosol | 32.18 | 36.33 |
| TraesCS4A01G319200.1 | Wheat | cytosol | 40.14 | 36.25 |
| KRH33867 | Soybean | cytosol | 32.87 | 35.98 |
| CDY39994 | Canola | cytosol | 31.83 | 35.94 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 35.29 | 35.79 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 34.26 | 35.74 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 35.29 | 35.42 |
| AT1G80110.1 | Thale cress | cytosol | 31.14 | 35.02 |
| PGSC0003DMT400063740 | Potato | cytosol | 33.91 | 34.15 |
| Solyc01g099990.2.1 | Tomato | cytosol | 33.91 | 33.79 |
| Solyc01g100000.2.1 | Tomato | cytosol | 31.14 | 33.21 |
| TraesCS4A01G041300.1 | Wheat | plastid | 36.68 | 33.12 |
| PGSC0003DMT400063744 | Potato | cytosol | 32.18 | 32.98 |
| Solyc01g100010.2.1 | Tomato | cytosol | 31.49 | 32.73 |
| KRG96762 | Soybean | cytosol | 31.83 | 32.06 |
| KRH68480 | Soybean | cytosol | 31.49 | 31.71 |
| TraesCS7A01G530500.1 | Wheat | extracellular | 15.22 | 30.99 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 32.18 | 29.52 |
| KRH68481 | Soybean | cytosol | 15.92 | 29.11 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 33.22 | 27.99 |
| TraesCS7A01G063500.1 | Wheat | cytosol | 11.42 | 27.27 |
| TraesCS7A01G063200.1 | Wheat | cytosol | 10.03 | 26.85 |
| TraesCS3A01G082500.1 | Wheat | plastid | 17.3 | 23.81 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 24.91 | 23.68 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 24.57 | 23.2 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 22.84 | 23.0 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 23.18 | 22.48 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 22.15 | 21.48 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G371000.1 | EnsemblPlantsGene:TraesCS7A01G371000 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 |
| PFAM:PF00646 | PFAM:PF14299 | PFscan:PS50181 | SEG:seg | SMART:SM00256 | SUPFAM:SSF81383 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:544286518..544288192
Molecular Weight (calculated)
31778.4 Da
IEP (calculated)
4.837
GRAVY (calculated)
-0.273
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTASTATAE EEVTRLEDLP ESCLAHVLAL TSPRDACRCA AVSPSFREAA ESDAVWDRFL PPDYRAVLLR CCSGRPPPLS SKKDAYLRLS DGAVLVDGGD
101: TAVWLARGSG AKCVALSARK LSLPWDDGEF SWRWTPHPRS RFAEVAQLVH CTGLDIYGRL PAAALTPATD YAAYLVFDVA DEGHRGLSFP DQETTVAVGG
201: RAASRHAVCL RPDDDEARKF RGVARADGGD DGVRRPALRD DRWSEIEMGR LRIDDAMAVK EEEVMVSFEV LEWYPKRGLI VEAVEFRPV
101: TAVWLARGSG AKCVALSARK LSLPWDDGEF SWRWTPHPRS RFAEVAQLVH CTGLDIYGRL PAAALTPATD YAAYLVFDVA DEGHRGLSFP DQETTVAVGG
201: RAASRHAVCL RPDDDEARKF RGVARADGGD DGVRRPALRD DRWSEIEMGR LRIDDAMAVK EEEVMVSFEV LEWYPKRGLI VEAVEFRPV
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.