Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G371000.1 | Wheat | cytosol | 65.89 | 68.17 |
| TraesCS7D01G351500.1 | Wheat | cytosol | 65.22 | 67.71 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 64.21 | 64.43 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 63.88 | 64.31 |
| HORVU7Hr1G072570.3 | Barley | cytosol | 63.21 | 64.29 |
| TraesCS3A01G079300.1 | Wheat | cytosol | 65.22 | 63.93 |
| TraesCS7A01G304800.1 | Wheat | cytosol | 62.88 | 63.3 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 65.55 | 62.82 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 64.21 | 62.75 |
| TraesCS3D01G079700.1 | Wheat | cytosol | 62.21 | 62.63 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 65.22 | 60.0 |
| Zm00001d024621_P001 | Maize | cytosol | 60.2 | 58.63 |
| Zm00001d032787_P001 | Maize | cytosol | 56.52 | 57.48 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 38.13 | 44.19 |
| OQU92610 | Sorghum | mitochondrion | 53.85 | 43.16 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 36.79 | 42.47 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 36.79 | 39.86 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 34.78 | 38.95 |
| Os02t0813000-00 | Rice | cytosol | 29.77 | 38.7 |
| Os04t0280500-00 | Rice | cytosol | 19.06 | 37.75 |
| AT1G80110.1 | Thale cress | cytosol | 32.11 | 37.35 |
| Bra035198.1-P | Field mustard | cytosol | 31.77 | 37.11 |
| CDX87293 | Canola | cytosol | 31.77 | 37.11 |
| Os02t0813350-01 | Rice | cytosol | 36.79 | 37.04 |
| CDY39994 | Canola | cytosol | 31.44 | 36.72 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 34.45 | 36.65 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 33.78 | 35.44 |
| Os12t0131400-01 | Rice | nucleus | 35.79 | 35.43 |
| Os02t0812500-01 | Rice | cytosol | 39.13 | 35.24 |
| KRH33867 | Soybean | cytosol | 30.77 | 34.85 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 33.44 | 34.72 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 31.1 | 33.57 |
| Os02t0813166-00 | Rice | cytosol, plastid | 29.1 | 33.21 |
| PGSC0003DMT400063740 | Potato | cytosol | 30.77 | 32.06 |
| KRG96762 | Soybean | cytosol | 30.77 | 32.06 |
| KRH68480 | Soybean | cytosol | 30.77 | 32.06 |
| Solyc01g100010.2.1 | Tomato | cytosol | 29.77 | 32.01 |
| PGSC0003DMT400063744 | Potato | cytosol | 30.1 | 31.91 |
| Solyc01g100000.2.1 | Tomato | cytosol | 28.76 | 31.73 |
| Os02t0813083-00 | Rice | extracellular | 12.04 | 31.58 |
| Solyc01g099990.2.1 | Tomato | cytosol | 30.43 | 31.38 |
| KRH68481 | Soybean | cytosol | 15.38 | 29.11 |
| Os10t0522400-01 | Rice | cytosol | 16.05 | 29.09 |
| Os12t0129700-01 | Rice | cytosol | 34.78 | 27.88 |
| Os02t0812600-00 | Rice | extracellular | 37.12 | 24.34 |
| Os03t0116700-01 | Rice | cytosol, extracellular | 23.08 | 23.23 |
| Os09t0525300-01 | Rice | cytosol | 20.4 | 21.71 |
| Os04t0571300-01 | Rice | cytosol, mitochondrion, peroxisome | 21.07 | 20.72 |
| Os02t0675800-01 | Rice | cytosol | 19.73 | 19.87 |
| Os02t0224900-01 | Rice | endoplasmic reticulum, extracellular | 9.36 | 11.81 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | EntrezGene:4344662 | ProteinID:BAC64996.1 | ProteinID:BAF22908.1 | ProteinID:BAT03839.1 |
| ProteinID:EAZ41521.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001810 | EnsemblPlantsGene:Os08g0150700 | EnsemblPlants:Os08t0150700-01 | PFAM:PF14299 | InterPro:PP2-like | PFscan:PS50181 |
| PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 | UniProt:Q84PX1 | SUPFAM:SSF81383 | UniParc:UPI00000045D0 | RefSeq:XP_015648682.1 |
| SEG:seg | : | : | : | : | : |
Description
F-box protein 407Cyclin-like F-box domain containing protein. (Os08t0150700-01)
Coordinates
chr8:+:2918636..2921281
Molecular Weight (calculated)
31612.7 Da
IEP (calculated)
5.084
GRAVY (calculated)
-0.064
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGGGGGGE AVEEGTTTRV GDLPEACLAD VIALTSPRDA CRLAAVSPSF RAAAESDAVW DRFLPPDYRA IAPLPPPPAT AAASGGKRMK KGVYLGLCDK
101: PVPVDDGSMM VWLEKESGAK CFALPARKLS LPWEDGEFSW RWTPHPLSRF EEVAQLVDCT CLDIYGRLPA AALTPATPYA AYLVFGTAAA AEGHRGLSFP
201: DQETTVSAAG RVVARHAVCL RPDDAEARKF RGVGLAGAGV PVRRPARRGD GWSEMELGRV AADEVAGAGG EDVVASFEVL GWYPKRGLVV ECMEFRPVV
101: PVPVDDGSMM VWLEKESGAK CFALPARKLS LPWEDGEFSW RWTPHPLSRF EEVAQLVDCT CLDIYGRLPA AALTPATPYA AYLVFGTAAA AEGHRGLSFP
201: DQETTVSAAG RVVARHAVCL RPDDAEARKF RGVGLAGAGV PVRRPARRGD GWSEMELGRV AADEVAGAGG EDVVASFEVL GWYPKRGLVV ECMEFRPVV
001: MIQSTMGHKQ SVDSRGKGRK VPGSSSMVQK HRVESSGGAI ISGPSLFDNL PEDCISNIIS FTSPRDACVA ASVSKTFESA VNSDSVWDKF LPSDYSSLVP
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
Arabidopsis Description
PP2B2Putative F-box protein PP2-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.