Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
- golgi 1
- plasma membrane 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G530500.1 | Wheat | extracellular | 50.99 | 54.23 |
| TraesCS7D01G518300.2 | Wheat | cytosol | 50.99 | 53.85 |
| TraesCS7D01G519100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 60.26 | 29.55 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.28 | 28.57 |
| KRH68481 | Soybean | cytosol | 29.8 | 28.48 |
| TraesCS7A01G531700.1 | Wheat | cytosol | 58.94 | 28.25 |
| TraesCS7D01G518400.1 | Wheat | cytosol | 58.28 | 27.67 |
| Os10t0522400-01 | Rice | cytosol | 29.14 | 26.67 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 55.63 | 26.67 |
| TraesCS7A01G530600.1 | Wheat | cytosol, mitochondrion | 57.62 | 25.36 |
| CDX87293 | Canola | cytosol | 39.74 | 23.44 |
| Bra035198.1-P | Field mustard | cytosol | 39.74 | 23.44 |
| CDY39994 | Canola | cytosol | 39.07 | 23.05 |
| Os02t0813000-00 | Rice | cytosol | 35.1 | 23.04 |
| AT1G80110.1 | Thale cress | cytosol | 39.07 | 22.96 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 39.07 | 22.87 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 40.4 | 22.1 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 37.09 | 20.97 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 35.76 | 20.85 |
| KRH33867 | Soybean | cytosol | 35.1 | 20.08 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 35.76 | 19.22 |
| Os08t0150700-01 | Rice | cytosol | 37.75 | 19.06 |
| Solyc01g100000.2.1 | Tomato | cytosol | 33.77 | 18.82 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 35.76 | 18.75 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 35.1 | 18.6 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 33.11 | 18.05 |
| Os02t0813350-01 | Rice | cytosol | 35.1 | 17.85 |
| PGSC0003DMT400063740 | Potato | cytosol | 33.77 | 17.77 |
| Solyc01g099990.2.1 | Tomato | cytosol | 33.77 | 17.59 |
| Os12t0131400-01 | Rice | nucleus | 35.1 | 17.55 |
| Os02t0812500-01 | Rice | cytosol | 37.75 | 17.17 |
| KRH68480 | Soybean | cytosol | 32.45 | 17.07 |
| Solyc01g100010.2.1 | Tomato | cytosol | 31.13 | 16.91 |
| KRG96762 | Soybean | cytosol | 31.79 | 16.72 |
| PGSC0003DMT400063744 | Potato | cytosol | 31.13 | 16.67 |
| Os02t0813166-00 | Rice | cytosol, plastid | 28.48 | 16.41 |
| Os09t0525300-01 | Rice | cytosol | 28.48 | 15.3 |
| Os03t0116700-01 | Rice | cytosol, extracellular | 27.15 | 13.8 |
| Os02t0675800-01 | Rice | cytosol | 27.15 | 13.8 |
| Os04t0571300-01 | Rice | cytosol, mitochondrion, peroxisome | 26.49 | 13.16 |
| Os12t0129700-01 | Rice | cytosol | 31.79 | 12.87 |
| Os02t0812600-00 | Rice | extracellular | 33.77 | 11.18 |
| Os02t0224900-01 | Rice | endoplasmic reticulum, extracellular | 10.6 | 6.75 |
| Os02t0813083-00 | Rice | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os04t0280500-00 | EnsemblPlantsGene:Os04g0280500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | ProteinID:BAS88370.1 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI00039388CC |
| UniProt:A0A0P0W863 | MapMan:35.1 | : | : | : | : |
Description
Similar to Non-S-locus F-box-like protein 2011 (Fragment). (Os04t0280500-00)
Coordinates
chr4:+:11894682..11896959
Molecular Weight (calculated)
15873.0 Da
IEP (calculated)
7.085
GRAVY (calculated)
-0.236
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRKSSGGGG GGSGMCDLPM DCIACIASLT SPGDACRLAA AAAALRPVAD SDDVWGSFLP PEWAGDGDAL DGKPGGREGE SKKEMFLRLC DLPVLLDGGK
101: LSFSLEKRSG AKKYMMRARA LGFGWSGYPY GGLVWIQNHP DSRFVVGAQN Q
101: LSFSLEKRSG AKKYMMRARA LGFGWSGYPY GGLVWIQNHP DSRFVVGAQN Q
001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP
Arabidopsis Description
PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.