Factsheet for Os02t0813000-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
plasma membrane 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0813350-01	Rice	cytosol	64.78	50.17
Os02t0813166-00	Rice	cytosol, plastid	51.3	45.04
KXG31332	Sorghum	cytosol	55.65	41.97
KXG31333	Sorghum	cytosol	52.17	39.47
Os04t0280500-00	Rice	cytosol	23.04	35.1
Os02t0812600-00	Rice	extracellular	68.7	34.65
Bra035198.1-P	Field mustard	cytosol	37.83	33.98
CDX87293	Canola	cytosol	37.83	33.98
CDY39994	Canola	cytosol	37.83	33.98
Os02t0812500-01	Rice	cytosol	47.83	33.13
Os12t0131400-01	Rice	nucleus	42.61	32.45
KRH68481	Soybean	cytosol	21.3	31.01
AT1G80110.1	Thale cress	cytosol	34.35	30.74
VIT_14s0060g02020.t01	Wine grape	cytosol	37.39	30.18
Os08t0150700-01	Rice	cytosol	38.7	29.77
VIT_14s0060g01990.t01	Wine grape	cytosol	35.65	29.6
KRH33867	Soybean	cytosol	33.91	29.55
VIT_14s0060g02000.t01	Wine grape	cytosol	36.96	29.51
PGSC0003DMT400063740	Potato	cytosol	36.09	28.92
Solyc01g099990.2.1	Tomato	cytosol	35.65	28.28
PGSC0003DMT400063744	Potato	cytosol	34.35	28.01
Solyc01g100010.2.1	Tomato	cytosol	33.48	27.7
KRH68480	Soybean	cytosol	32.61	26.13
Os12t0129700-01	Rice	cytosol	42.17	26.01
Solyc01g100000.2.1	Tomato	cytosol	30.0	25.46
KRG96762	Soybean	cytosol	31.74	25.44
GSMUA_Achr5P10170_001	Banana	cytosol	16.52	23.75
Os10t0522400-01	Rice	cytosol	16.96	23.64
Os02t0675800-01	Rice	cytosol	25.65	19.87
Os02t0813083-00	Rice	extracellular	9.57	19.3
Os09t0525300-01	Rice	cytosol	23.48	19.22
Os03t0116700-01	Rice	cytosol, extracellular	24.35	18.86
Os04t0571300-01	Rice	cytosol, mitochondrion, peroxisome	23.04	17.43
Os02t0224900-01	Rice	endoplasmic reticulum, extracellular	11.3	10.97

Protein Annotations

EnsemblPlants:Os02t0813000-00	EnsemblPlantsGene:Os02g0813000	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF2
PFAM:PF14299	PFscan:PS50181	ProteinID:BAS81533.1	SEG:seg	SUPFAM:SSF81383	UniParc:UPI000393B9B7
UniProt:A0A0P0VR40	MapMan:35.1	:	:	:	:

Description

F-box protein 118, F-box protein 119F-box domain, cyclin-like domain containing protein. (Os02t0813000-00)

Coordinates

chr2:+:34817687..34822954

Molecular Weight (calculated)

25424.2 Da

IEP (calculated)

5.407

GRAVY (calculated)

-0.204

Length

230 amino acids

Sequence
(BLAST)

001: MNFLCFFPFT KKPDSSKGAE ASPSMEEGEA CDDCECEIAR LPEELLSAAI SLTAPRDAFR AAAVSRAFRA AADSDAVWAS FLPRDLPDLA DGELSPAPPS
101: KKDLFLRLSA GHYHLLPDRL KSMWLDREKG AKCYMLSARA LQISWGDSPQ YWSWIPLADS RFKEGAELLS VCWLEIRGKL PGKKLSQNTN YAAYLVYKIA
201: DRSYGLDFPF QEASVSIGGS ITARQVSVVQ

Best Arabidopsis Sequence Match ( AT2G02230.1 )
(BLAST)

001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN

Arabidopsis Description

PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.