Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G304800.1 | Wheat | cytosol | 90.48 | 89.56 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 90.14 | 89.23 |
| TraesCS7D01G300300.1 | Wheat | cytosol | 90.14 | 88.93 |
| HORVU3Hr1G014270.1 | Barley | cytosol | 84.01 | 79.17 |
| Os08t0150700-01 | Rice | cytosol | 64.29 | 63.21 |
| HORVU0Hr1G021610.3 | Barley | cytosol | 63.27 | 57.23 |
| Zm00001d032787_P001 | Maize | cytosol | 56.8 | 56.8 |
| Zm00001d024621_P001 | Maize | cytosol | 58.16 | 55.7 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 38.1 | 43.41 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 37.76 | 42.86 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 39.46 | 42.03 |
| OQU92610 | Sorghum | mitochondrion | 53.06 | 41.82 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 36.39 | 40.07 |
| Bra035198.1-P | Field mustard | cytosol | 32.31 | 37.11 |
| CDX87293 | Canola | cytosol | 32.31 | 37.11 |
| HORVU2Hr1G104500.6 | Barley | cytosol | 32.99 | 37.02 |
| CDY39994 | Canola | cytosol | 31.97 | 36.72 |
| HORVU6Hr1G089430.1 | Barley | cytosol, plastid | 39.46 | 36.59 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 34.69 | 36.3 |
| AT1G80110.1 | Thale cress | cytosol | 31.63 | 36.19 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 35.03 | 36.14 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 35.37 | 36.11 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 33.33 | 35.38 |
| KRH33867 | Soybean | cytosol | 31.29 | 34.85 |
| HORVU6Hr1G090000.1 | Barley | cytosol, plastid | 38.78 | 33.73 |
| HORVU7Hr1G012610.1 | Barley | cytosol | 33.67 | 33.56 |
| PGSC0003DMT400063740 | Potato | cytosol | 31.63 | 32.4 |
| KRG96762 | Soybean | cytosol | 30.95 | 31.71 |
| KRH68480 | Soybean | cytosol | 30.95 | 31.71 |
| HORVU4Hr1G086110.1 | Barley | cytosol | 16.33 | 31.58 |
| HORVU6Hr1G090010.2 | Barley | cytosol, nucleus, plastid | 36.39 | 31.47 |
| Solyc01g099990.2.1 | Tomato | cytosol | 30.95 | 31.38 |
| Solyc01g100000.2.1 | Tomato | cytosol | 28.91 | 31.37 |
| Solyc01g100010.2.1 | Tomato | cytosol | 29.59 | 31.3 |
| HORVU6Hr1G089480.1 | Barley | cytosol, extracellular | 18.03 | 30.99 |
| PGSC0003DMT400063744 | Potato | cytosol | 29.59 | 30.85 |
| HORVU5Hr1G124090.2 | Barley | cytosol | 31.29 | 30.36 |
| KRH68481 | Soybean | cytosol | 15.65 | 29.11 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 23.13 | 23.69 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 23.81 | 23.18 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 13.27 | 22.94 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 12.24 | 21.18 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 11.56 | 20.0 |
| HORVU4Hr1G040780.1 | Barley | mitochondrion, plastid | 8.5 | 20.0 |
| HORVU2Hr1G094960.4 | Barley | cytosol | 12.59 | 18.69 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G072570.3 | EnsemblPlantsGene:HORVU7Hr1G072570 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF12 |
| PFAM:PF00646 | PFAM:PF14299 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI000B47D9F9 | UniProt:A0A287WV14 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:405898696..405901415
Molecular Weight (calculated)
32014.0 Da
IEP (calculated)
5.914
GRAVY (calculated)
-0.142
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSHASGMET AEERTRVCDL PEACVAHVIA LTSPRDACRC AAVSPCFRDA AESDVVWARF LPPDYLQLHQ APARRFPLSR SASTAASSTK KEAYLGLTDV
101: AVLVDGGGMA LWLAKGSGAK CVALSARRLS LPWEDGEYSW TWTPHPLSSR FADVAQLVDC TCLDIYGRLP ITALTPATAY AAYLVFATED GHRGLSFPDQ
201: ETTVRVGGSA PSRHAVCLRP DPADARRFRD GKGTDDVHMR GPALRGDGWW EVEMGRLRTV DEAMVGEEVA VSFEIMGWYP KRGLVVEGIE FRPI
101: AVLVDGGGMA LWLAKGSGAK CVALSARRLS LPWEDGEYSW TWTPHPLSSR FADVAQLVDC TCLDIYGRLP ITALTPATAY AAYLVFATED GHRGLSFPDQ
201: ETTVRVGGSA PSRHAVCLRP DPADARRFRD GKGTDDVHMR GPALRGDGWW EVEMGRLRTV DEAMVGEEVA VSFEIMGWYP KRGLVVEGIE FRPI
001: MMLPEACVAT ILSFTTPADT ISSAAVSSVF RVAGDSDFVW EKFLPTDYCH VISRSTDPHR IFSSKKELYR CLCESILIDN GRKIFKIEKL SGKISYILSS
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
101: RDLSITWSDQ RHYWSWSPRS DSRFSEGVQL IMTDWLEIIG KIQTGALSPN TNYGAYLIMK VTSRAYGLDL VPAETSIKVG NGEKKIKSTY LSCLDNKKQQ
201: MERVFYGQRE QRMATHEVVR SHRREPEVRD DGWMEIELGE FETGSGEGDD DKEVVMSLTE VKGYQLKGGI AIDGIEVRPK PLKVRAGTN
Arabidopsis Description
PP2B15F-box protein PP2-B15 [Source:UniProtKB/Swiss-Prot;Acc:O80494]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.