CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G371000.1	Wheat	cytosol	43.43	56.06
TraesCS7D01G351500.1	Wheat	cytosol	41.82	54.17
Os08t0150700-01	Rice	cytosol	43.16	53.85
TraesCS7A01G304800.1	Wheat	cytosol	42.63	53.54
HORVU7Hr1G072570.3	Barley	cytosol	41.82	53.06
TraesCS7B01G205100.1	Wheat	cytosol	41.55	52.19
TraesCS7D01G300300.1	Wheat	cytosol	41.55	52.01
TraesCS3D01G079700.1	Wheat	cytosol	40.48	50.84
HORVU3Hr1G014270.1	Barley	cytosol	41.55	49.68
TraesCS3A01G079300.1	Wheat	cytosol	40.48	49.51
TraesCS3B01G094500.1	Wheat	cytosol	40.21	49.02
HORVU0Hr1G021610.3	Barley	cytosol	42.36	48.62
GSMUA_Achr1P20450_001	Banana	plastid	30.29	43.8
GSMUA_Achr6P36620_001	Banana	cytosol	28.42	40.93
GSMUA_Achr1P05750_001	Banana	cytosol	27.61	37.32
GSMUA_Achr1P05730_001	Banana	cytosol	26.01	36.33
EES05996	Sorghum	cytosol	26.01	34.77
EES05998	Sorghum	cytosol	25.2	33.81
KRH33867	Soybean	cytosol	23.59	33.33
EES05994	Sorghum	cytosol	29.76	32.84
VIT_14s0060g02020.t01	Wine grape	cytosol	24.66	32.28
GSMUA_Achr1P05720_001	Banana	cytosol	24.13	32.03
OQU85929	Sorghum	cytosol	24.4	31.93
KXG28410	Sorghum	cytosol	23.06	31.85
Bra035198.1-P	Field mustard	cytosol	21.72	31.64
CDX87293	Canola	cytosol	21.72	31.64
AT1G80110.1	Thale cress	cytosol	21.72	31.52
KXG31333	Sorghum	cytosol	25.47	31.25
CDY39994	Canola	cytosol	21.45	31.25
KXG31332	Sorghum	cytosol	25.47	31.15
KRG96762	Soybean	cytosol	23.86	31.01
VIT_14s0060g02000.t01	Wine grape	cytosol	23.86	30.9
KRH68480	Soybean	cytosol	23.59	30.66
VIT_14s0060g01990.t01	Wine grape	cytosol	22.52	30.32
OQU85933	Sorghum	cytosol, mitochondrion	20.64	29.96
PGSC0003DMT400063744	Potato	cytosol	21.72	28.72
PGSC0003DMT400063740	Potato	cytosol	21.98	28.57
Solyc01g099990.2.1	Tomato	cytosol	21.98	28.28
KRH68481	Soybean	cytosol	11.8	27.85
Solyc01g100010.2.1	Tomato	cytosol	20.64	27.7
Solyc01g100000.2.1	Tomato	cytosol	20.11	27.68
EER95641	Sorghum	cytosol	17.69	22.45
EER99217	Sorghum	cytosol	16.89	21.07
EER94629	Sorghum	plasma membrane	16.89	20.93
KXG31015	Sorghum	cytosol	16.35	20.27
EES11284	Sorghum	cytosol	16.09	19.17
OQU85932	Sorghum	mitochondrion	22.79	15.15

Protein Annotations

EnsemblPlants:OQU92610	EnsemblPlantsGene:SORBI_3001G375400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:F-box-like_dom_sf
InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF12	PFAM:PF14299	ProteinID:OQU92610	ProteinID:OQU92610.1
SEG:seg	SUPFAM:SSF81383	UniParc:UPI000B8BA30A	UniProt:A0A1Z5S9J0	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:+:66391830..66393932

Molecular Weight (calculated)

40413.0 Da

IEP (calculated)

8.731

GRAVY (calculated)

-0.286

Length

373 amino acids

Sequence
(BLAST)

001: ALVNSRSFSV KPTQQCSRSL SAGIVITCLV ISVTTAQKQQ TYSHTPILQS RKPIDIRRQI GDGRKSSGGD QGGRPPGPEV CLAHAIALTS PRDACRCAAV
101: SPAFRAAADS DHVWRRFLPQ GQDGYLRLCD TGVVLVDGQG NAWMWVDKAS GAKCYVLSAR ALSLPWDDGE FSWRWTPHPL SSDKHARHGS ASKQVNLQDG
201: RLLASSLALS SIEQLVKFRD AVGKNNSILH VAGRLPVAEL TPATVYAAYL VYGLADGHRG LSFPDQETTV ALGSGRVAGA ARHAVCLHPD EAEERKFRAV
301: SRGTGAEEPR PPRLPENGWS EMEMGRLRTP GDGERETAVA GKDEEVVVVS FVVLGWYPKR GLIVEGIEFR PVY

Best Arabidopsis Sequence Match ( AT2G02340.1 )
(BLAST)

001: MTKTRCMHEH FRKIVQRVKK TLRLSASDKS HGVAELDDLP EECVSIIVSF TSPQDACVLA SVSKTFASAV KSDIVWEKFI PPEYESLISQ SRAFKFLSKK
101: ELYFALCDKS VLIDDGKKSL WIEKANAKRC IMISAMNLAI AWGNSPQSWR WIPDPQARFE TVAELLEVCL FEIRGRINSR VISPKTRYSA YIVYKKLNIC
201: YGFENVAVEV VVGVVGQDLE ESCRRYICFD ETMDEQFRRR DRGKNLVKPE RRKDGWMEIK IGEFFNEGGL LNDDEIEMVA LEAKQRHWKR GLIIQGIEIR
301: PTNIR

Arabidopsis Description

PP2B8Putative F-box protein PP2-B8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVQ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.