Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G560000.1 | Wheat | cytosol | 73.81 | 69.11 |
| TraesCS5B01G560100.1 | Wheat | cytosol | 71.09 | 66.77 |
| TraesCS3B01G018900.1 | Wheat | cytosol | 68.03 | 66.67 |
| TraesCS5B01G559800.1 | Wheat | cytosol | 67.69 | 65.89 |
| GSMUA_Achr1P20450_001 | Banana | plastid | 44.22 | 50.39 |
| GSMUA_Achr6P36620_001 | Banana | cytosol | 41.16 | 46.72 |
| GSMUA_Achr1P05750_001 | Banana | cytosol | 42.86 | 45.65 |
| GSMUA_Achr1P05730_001 | Banana | cytosol | 39.46 | 43.45 |
| VIT_14s0060g02020.t01 | Wine grape | cytosol | 41.84 | 43.16 |
| VIT_14s0060g02000.t01 | Wine grape | cytosol | 40.48 | 41.32 |
| TraesCS4B01G262300.1 | Wheat | cytosol | 37.07 | 41.29 |
| KRH33867 | Soybean | cytosol | 36.73 | 40.91 |
| VIT_14s0060g01990.t01 | Wine grape | cytosol | 37.76 | 40.07 |
| Bra035198.1-P | Field mustard | cytosol | 34.69 | 39.84 |
| CDX87293 | Canola | cytosol | 34.69 | 39.84 |
| CDY39994 | Canola | cytosol | 34.69 | 39.84 |
| TraesCS6B01G422300.1 | Wheat | cytosol | 39.8 | 39.53 |
| TraesCS6B01G423500.1 | Wheat | cytosol | 39.8 | 39.39 |
| AT1G80110.1 | Thale cress | cytosol | 34.01 | 38.91 |
| GSMUA_Achr1P05720_001 | Banana | cytosol | 37.07 | 38.79 |
| TraesCS6B01G423200.1 | Wheat | cytosol | 39.46 | 38.41 |
| PGSC0003DMT400063740 | Potato | cytosol | 36.73 | 37.63 |
| TraesCS6B01G422400.1 | Wheat | cytosol | 38.1 | 37.58 |
| TraesCS3B01G094500.1 | Wheat | cytosol | 39.12 | 37.58 |
| TraesCS6B01G421100.1 | Wheat | cytosol | 40.14 | 37.34 |
| TraesCS5B01G558600.1 | Wheat | cytosol | 34.69 | 37.23 |
| TraesCS7B01G205100.1 | Wheat | cytosol | 37.41 | 37.04 |
| Solyc01g099990.2.1 | Tomato | cytosol | 36.39 | 36.9 |
| TraesCS6B01G423400.1 | Wheat | cytosol | 38.78 | 36.31 |
| KRH68480 | Soybean | cytosol | 34.69 | 35.54 |
| PGSC0003DMT400063744 | Potato | cytosol | 34.01 | 35.46 |
| KRG96762 | Soybean | cytosol | 34.35 | 35.19 |
| Solyc01g100010.2.1 | Tomato | cytosol | 32.99 | 34.89 |
| Solyc01g100000.2.1 | Tomato | cytosol | 31.97 | 34.69 |
| KRH68481 | Soybean | cytosol | 17.35 | 32.28 |
| TraesCS3B01G097600.1 | Wheat | cytosol | 29.93 | 31.77 |
| TraesCS7B01G449100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 31.97 | 30.52 |
| TraesCS7B01G448100.1 | Wheat | cytosol, extracellular | 30.95 | 28.89 |
| TraesCS6B01G422200.1 | Wheat | mitochondrion | 23.47 | 28.63 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 22.45 | 22.92 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 23.47 | 22.48 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 21.77 | 21.33 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 21.43 | 21.14 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 21.77 | 21.12 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G558800.1 | EnsemblPlantsGene:TraesCS5B01G558800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| InterPro:PP2-like | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF5 | PFAM:PF14299 | SUPFAM:SSF81383 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5B:+:706022166..706024290
Molecular Weight (calculated)
32594.2 Da
IEP (calculated)
4.657
GRAVY (calculated)
-0.360
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQSSKENGL IQRVPEECLT TVIGLTSPAD ACRSAVVSAG FRSAADSDAV WERFLPLDCD AVLERAVHFV DSSSRKELFM DLSDEHVLLD DGKRSFGLQR
101: SSGAKCYMLS VREMAIAWVK IDLYWRERSD PDSRFSMVAE LMSVCWLSIS GHISTKELSP GTHYAAYLVF KLTHDASGLA SPQQRSVLSV GGRQSSTHTA
201: SLHPCNRTDS SCTGEMADGE PHDHERDDGV VVRYPGPRVD GWLELEMGDF HTGDSDDEAT AAEDVDMILH ECEELQWKKG LIIEGIEIRP KKIN
101: SSGAKCYMLS VREMAIAWVK IDLYWRERSD PDSRFSMVAE LMSVCWLSIS GHISTKELSP GTHYAAYLVF KLTHDASGLA SPQQRSVLSV GGRQSSTHTA
201: SLHPCNRTDS SCTGEMADGE PHDHERDDGV VVRYPGPRVD GWLELEMGDF HTGDSDDEAT AAEDVDMILH ECEELQWKKG LIIEGIEIRP KKIN
001: MIQSTMGHKQ SVDSRGKGRK VPGSSSMVQK HRVESSGGAI ISGPSLFDNL PEDCISNIIS FTSPRDACVA ASVSKTFESA VNSDSVWDKF LPSDYSSLVP
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI
Arabidopsis Description
PP2B2Putative F-box protein PP2-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.