Factsheet for TraesCS6B01G422200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G367900.1	Wheat	cytosol	94.19	78.82
TraesCS3B01G097600.1	Wheat	cytosol	46.47	40.43
TraesCS6B01G422300.1	Wheat	cytosol	46.89	38.18
TraesCS6B01G422400.1	Wheat	cytosol	45.64	36.91
TraesCS6B01G423500.1	Wheat	cytosol	40.66	33.0
GSMUA_Achr5P10170_001	Banana	cytosol	21.16	31.88
TraesCS6B01G423200.1	Wheat	cytosol	39.83	31.79
TraesCS4B01G262300.1	Wheat	cytosol	33.2	30.3
TraesCS6B01G423400.1	Wheat	cytosol	38.59	29.62
TraesCS5B01G558600.1	Wheat	cytosol	30.71	27.01
CDX87293	Canola	cytosol	28.22	26.56
Bra035198.1-P	Field mustard	cytosol	28.22	26.56
CDY39994	Canola	cytosol	27.8	26.17
AT1G80110.1	Thale cress	cytosol	26.97	25.29
VIT_14s0060g01990.t01	Wine grape	cytosol	29.05	25.27
VIT_14s0060g02000.t01	Wine grape	cytosol	29.05	24.31
VIT_14s0060g02020.t01	Wine grape	cytosol	28.63	24.21
KRH33867	Soybean	cytosol	25.73	23.48
TraesCS5B01G558800.1	Wheat	nucleus	28.63	23.47
TraesCS6B01G421100.1	Wheat	cytosol	30.71	23.42
PGSC0003DMT400063740	Potato	cytosol	27.8	23.34
TraesCS3B01G018900.1	Wheat	cytosol	29.05	23.33
TraesCS5B01G559800.1	Wheat	cytosol	28.22	22.52
Solyc01g100000.2.1	Tomato	cytosol	25.31	22.51
TraesCS5B01G560100.1	Wheat	cytosol	29.05	22.36
Solyc01g099990.2.1	Tomato	cytosol	26.14	21.72
TraesCS5B01G560000.1	Wheat	cytosol	28.22	21.66
Solyc01g100010.2.1	Tomato	cytosol	23.65	20.5
TraesCS3B01G094500.1	Wheat	cytosol	25.73	20.26
PGSC0003DMT400063744	Potato	cytosol	23.65	20.21
KRH68480	Soybean	cytosol	24.07	20.21
KRG96762	Soybean	cytosol	24.07	20.21
TraesCS7B01G205100.1	Wheat	cytosol	24.9	20.2
TraesCS7B01G449100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.41	17.53
TraesCS7B01G448100.1	Wheat	cytosol, extracellular	21.58	16.51
KRH68481	Soybean	cytosol	9.96	15.19
TraesCS5B01G313700.1	Wheat	cytosol	15.77	13.19
TraesCS1B01G196400.1	Wheat	cytosol, plasma membrane	13.69	11.0
TraesCS2B01G418200.2	Wheat	cytosol	13.28	10.56
TraesCS4B01G356300.1	Wheat	cytosol	12.86	10.1
TraesCS6B01G269300.1	Wheat	cytosol	11.62	9.4

Protein Annotations

EnsemblPlants:TraesCS6B01G422200.1	EnsemblPlantsGene:TraesCS6B01G422200	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF2	PFAM:PF14299
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:692578819..692580391

Molecular Weight (calculated)

26939.0 Da

IEP (calculated)

8.602

GRAVY (calculated)

-0.478

Length

241 amino acids

Sequence
(BLAST)

001: MFLPRNLPRF AKGELPRTPP SSKKELFRRL SDQPALLPHK LMSMQLDRAT GAQRFTLSAR ALQNRAPVAS LSNCSKGNKR IFSEAAQFYR VNELEIRAKV
101: QRKMLSQNTT YAVYLVFKLE YVYYEFGFPY EVASVGVAGR ESTRLVSVQG NIKDGDGDGN APHRHIFQGC RGTLSCDAIT SGEDIHFPRE NADGWMEVEL
201: GEFHNDEADD GGEVSISFTG ESKSCLKVLG IELISKQQKP T

Best Arabidopsis Sequence Match ( AT1G80110.1 )
(BLAST)

001: MNNLPEDCIA KILSLTTPLD VCRLSAVSSI FRSAAGSDDV WNHFLPADFP AGFAAPAGLP TRKQLFFSLV DNPLLINGTL LSFSLERKSG NKCYMMAARA
101: LNIVWGHEQR YWHWISLPNT RFGEVAELIM VWWLEITGKI NITLLSDDTL YAAYFVFKWN HSPYGFRQPV ETSLVLADTE STDNVVQPSM ISLMQDSGGE
201: EGQSPVLRRD GWYEVELGQF FKRRGDLGEI EMSLKETKGP YEKKGLIVYG IEIRPVP

Arabidopsis Description

PP2B11F-box protein PP2-B11 [Source:UniProtKB/Swiss-Prot;Acc:Q949S5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.