Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42484 | Canola | cytosol | 85.57 | 87.37 |
| CDX89095 | Canola | cytosol | 85.57 | 87.06 |
| Bra014456.1-P | Field mustard | cytosol | 85.22 | 86.71 |
| HORVU1Hr1G048690.1 | Barley | peroxisome | 37.8 | 64.71 |
| VIT_15s0048g01930.t01 | Wine grape | cytosol | 63.23 | 63.67 |
| HORVU2Hr1G094960.4 | Barley | cytosol | 42.27 | 62.12 |
| KRH65151 | Soybean | cytosol | 58.76 | 60.85 |
| KRH48244 | Soybean | cytosol | 58.42 | 60.5 |
| Solyc10g017960.1.1 | Tomato | cytosol | 60.14 | 59.93 |
| PGSC0003DMT400071397 | Potato | cytosol | 59.11 | 59.72 |
| Solyc01g091700.2.1 | Tomato | cytosol | 58.76 | 59.58 |
| GSMUA_Achr5P03300_001 | Banana | cytosol | 58.76 | 58.76 |
| GSMUA_Achr11P... | Banana | cytosol | 57.39 | 58.39 |
| PGSC0003DMT400026564 | Potato | cytosol | 58.42 | 57.63 |
| Zm00001d029673_P001 | Maize | plasma membrane | 58.42 | 57.43 |
| GSMUA_Achr4P27200_001 | Banana | cytosol | 56.36 | 57.14 |
| TraesCS1D01G187700.1 | Wheat | cytosol, plasma membrane | 58.76 | 57.0 |
| TraesCS5B01G313700.1 | Wheat | cytosol | 56.36 | 56.94 |
| TraesCS5A01G312700.1 | Wheat | cytosol | 56.01 | 56.79 |
| TraesCS5D01G319500.1 | Wheat | cytosol | 56.01 | 56.79 |
| TraesCS1B01G196400.1 | Wheat | cytosol, plasma membrane | 58.42 | 56.67 |
| EER94629 | Sorghum | plasma membrane | 58.42 | 56.48 |
| HORVU1Hr1G048700.4 | Barley | cytosol, nucleus, plasma membrane | 58.42 | 56.29 |
| GSMUA_Achr1P03900_001 | Banana | cytosol | 56.36 | 56.16 |
| HORVU5Hr1G080530.1 | Barley | cytosol | 55.33 | 56.1 |
| TraesCS1A01G188700.1 | Wheat | plasma membrane | 58.42 | 55.92 |
| Os03t0116700-01 | Rice | cytosol, extracellular | 57.04 | 55.89 |
| GSMUA_Achr7P05860_001 | Banana | cytosol | 55.67 | 55.86 |
| Os09t0525300-01 | Rice | cytosol | 53.61 | 55.52 |
| EER95641 | Sorghum | cytosol | 56.01 | 55.44 |
| TraesCS2D01G397700.1 | Wheat | cytosol | 56.36 | 55.03 |
| TraesCS2A01G400100.1 | Wheat | cytosol | 56.36 | 55.03 |
| GSMUA_Achr3P12400_001 | Banana | cytosol | 54.3 | 54.86 |
| GSMUA_Achr4P24870_001 | Banana | cytosol | 57.04 | 54.79 |
| TraesCS6B01G269300.1 | Wheat | cytosol | 55.67 | 54.36 |
| TraesCS6D01G237300.1 | Wheat | cytosol | 55.67 | 54.36 |
| TraesCS6A01G256100.1 | Wheat | cytosol | 55.67 | 54.36 |
| AT1G63090.1 | Thale cress | cytosol | 53.95 | 54.33 |
| Os04t0571300-01 | Rice | cytosol, mitochondrion, peroxisome | 56.7 | 54.28 |
| Zm00001d021224_P001 | Maize | cytosol | 54.64 | 53.72 |
| TraesCS2B01G418200.2 | Wheat | cytosol | 55.67 | 53.47 |
| EER99217 | Sorghum | cytosol | 54.64 | 53.18 |
| KXG31015 | Sorghum | cytosol | 54.98 | 53.16 |
| Zm00001d027361_P001 | Maize | cytosol | 54.3 | 53.02 |
| Os02t0675800-01 | Rice | cytosol | 53.95 | 52.86 |
| EES11284 | Sorghum | cytosol | 56.36 | 52.4 |
| Zm00001d051447_P002 | Maize | cytosol | 52.92 | 52.03 |
| TraesCS4B01G356300.1 | Wheat | cytosol | 54.64 | 51.79 |
| GSMUA_Achr11P... | Banana | cytosol | 31.96 | 51.38 |
| TraesCS4D01G350000.1 | Wheat | cytosol | 53.95 | 51.14 |
| TraesCS5A01G525700.1 | Wheat | cytosol | 53.61 | 50.98 |
| AT1G12710.2 | Thale cress | cytosol | 57.39 | 50.15 |
| AT5G52120.1 | Thale cress | cytosol | 48.8 | 48.8 |
| AT3G53000.1 | Thale cress | cytosol | 49.83 | 48.33 |
| Zm00001d026078_P001 | Maize | cytosol | 47.42 | 47.75 |
| HORVU4Hr1G086110.1 | Barley | cytosol | 24.74 | 47.37 |
| Os10t0522400-01 | Rice | cytosol | 26.12 | 46.06 |
| Zm00001d024256_P001 | Maize | cytosol, mitochondrion | 36.08 | 42.17 |
| Zm00001d035636_P001 | Maize | plastid | 35.74 | 39.85 |
| Zm00001d021854_P001 | Maize | cytosol | 11.68 | 38.64 |
| HORVU2Hr1G049730.1 | Barley | cytosol | 21.99 | 37.65 |
| HORVU5Hr1G055050.1 | Barley | mitochondrion | 21.65 | 37.06 |
| Os02t0224900-01 | Rice | endoplasmic reticulum, extracellular | 28.52 | 35.02 |
| AT2G02360.1 | Thale cress | nucleus | 25.09 | 26.84 |
| AT1G80110.1 | Thale cress | cytosol | 21.65 | 24.51 |
| AT5G24560.1 | Thale cress | cytosol | 16.15 | 24.1 |
| AT2G02240.1 | Thale cress | cytosol | 26.46 | 24.06 |
| AT1G09155.1 | Thale cress | cytosol | 23.37 | 23.53 |
| AT2G02340.1 | Thale cress | cytosol | 24.4 | 23.28 |
| AT2G02300.1 | Thale cress | cytosol | 21.65 | 22.18 |
| AT2G02310.1 | Thale cress | cytosol | 23.37 | 22.15 |
| AT1G56240.1 | Thale cress | cytosol | 20.96 | 21.48 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 21.31 | 21.09 |
| AT2G02250.1 | Thale cress | cytosol | 22.34 | 20.97 |
| AT1G56250.1 | Thale cress | cytosol | 20.27 | 20.92 |
| AT2G02320.1 | Thale cress | mitochondrion | 20.27 | 19.22 |
| AT2G02230.1 | Thale cress | cytosol | 21.99 | 19.05 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.6 | EntrezGene:825278 | ProteinID:AEE80146.1 | ArrayExpress:AT3G61060 | EnsemblPlantsGene:AT3G61060 |
| RefSeq:AT3G61060 | TAIR:AT3G61060 | RefSeq:AT3G61060-TAIR-G | EnsemblPlants:AT3G61060.2 | TAIR:AT3G61060.2 | Symbol:AtPP2-A13 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | UniProt:F4JD33 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008270 | GO:GO:0009611 | GO:GO:0030246 | InterPro:IPR001810 | RefSeq:NP_974470.1 |
| PFAM:PF14299 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2-like |
| PFscan:PS50181 | PANTHER:PTHR31960 | PANTHER:PTHR31960:SF3 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI000034F043 |
Description
AtPP2-A13Phloem protein 2-A13 [Source:UniProtKB/TrEMBL;Acc:F4JD33]
Coordinates
chr3:+:22602910..22604578
Molecular Weight (calculated)
33244.7 Da
IEP (calculated)
8.557
GRAVY (calculated)
-0.365
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGANISGGSP EFDRNDDVYS RKLRLVDLPE NCVALIMTRL DPPEICRLAR LNRMFRRASS ADFIWESKLP ANYRVIAHKV FDEITLTKLI KKDLYAKLSQ
101: PNLFDDGTKQ ELWIDKNTGR LCLSISSKAL RITGIDDRRY WSHIPTDESR FQSAAYVQQI WWFEVGGEFE IQFPSGTYSL FFRIQLGKTS KRLGRRICNS
201: EHIHGWDIKP VRFQLATSDN QQAVSLCYLN NNPGSWSHYH VGDFKVTNPD VSTGIKFSMT QIDCTHTKGG LCIDSVLILP KECAKEVIGS Q
101: PNLFDDGTKQ ELWIDKNTGR LCLSISSKAL RITGIDDRRY WSHIPTDESR FQSAAYVQQI WWFEVGGEFE IQFPSGTYSL FFRIQLGKTS KRLGRRICNS
201: EHIHGWDIKP VRFQLATSDN QQAVSLCYLN NNPGSWSHYH VGDFKVTNPD VSTGIKFSMT QIDCTHTKGG LCIDSVLILP KECAKEVIGS Q
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.