Factsheet for AT2G02310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09376	Canola	cytosol	42.35	67.01
AT2G02300.1	Thale cress	cytosol	51.79	55.99
Bra026605.1-P	Field mustard	cytosol	47.56	55.94
AT2G02360.1	Thale cress	nucleus	47.88	54.04
AT2G02240.1	Thale cress	cytosol	51.14	49.06
AT2G02250.1	Thale cress	cytosol	49.19	48.71
AT2G02350.2	Thale cress	cytosol, mitochondrion	44.63	46.6
AT2G02340.1	Thale cress	cytosol	42.35	42.62
VIT_00s0214g00130.t01	Wine grape	cytosol	36.16	40.07
AT2G02320.1	Thale cress	mitochondrion	39.74	39.74
AT2G02230.1	Thale cress	cytosol	43.0	39.29
AT5G24560.1	Thale cress	cytosol	24.1	37.95
VIT_00s0214g00150.t01	Wine grape	cytosol	36.16	36.27
VIT_00s0214g00060.t01	Wine grape	cytosol	32.25	34.49
Solyc04g050990.2.1	Tomato	cytosol	33.22	34.34
AT1G80110.1	Thale cress	cytosol	28.34	33.85
KRG92586	Soybean	cytosol, plastid	32.9	33.33
PGSC0003DMT400031292	Potato	cytosol	32.25	33.33
KRH68844	Soybean	cytosol	33.88	32.81
Solyc05g055870.2.1	Tomato	cytosol	32.9	32.79
AT1G56250.1	Thale cress	cytosol	29.97	32.62
AT1G56240.1	Thale cress	cytosol	29.64	32.04
PGSC0003DMT400060018	Potato	cytosol	32.25	31.63
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	35.83	31.52
VIT_00s0214g00090.t01	Wine grape	cytosol	34.2	31.16
AT1G09155.1	Thale cress	cytosol	28.66	30.45
AT3G61060.2	Thale cress	cytosol	22.15	23.37
AT5G52120.1	Thale cress	cytosol	21.82	23.02
AT3G53000.1	Thale cress	cytosol	22.15	22.67
AT1G63090.1	Thale cress	cytosol	20.85	22.15
AT1G12710.2	Thale cress	cytosol	20.85	19.22

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EntrezGene:814762	ProteinID:AAC78514.1	ProteinID:AEC05565.1	ArrayExpress:AT2G02310
EnsemblPlantsGene:AT2G02310	RefSeq:AT2G02310	TAIR:AT2G02310	RefSeq:AT2G02310-TAIR-G	EnsemblPlants:AT2G02310.1	TAIR:AT2G02310.1
Symbol:AtPP2-B6	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0030246	InterPro:IPR001810	RefSeq:NP_178337.1	PFAM:PF00646	PFAM:PF14299	PO:PO:0000084
PO:PO:0000293	PO:PO:0007115	PO:PO:0009005	PO:PO:0009025	PO:PO:0025022	InterPro:PP2-like
PFscan:PS50181	PANTHER:PTHR32278	PANTHER:PTHR32278:SF6	UniProt:Q9ZVR0	SMART:SM00256	SUPFAM:SSF81383
UniParc:UPI00000AA8E6	SEG:seg	:	:	:	:

Description

PP2B6Putative F-box protein PP2-B6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR0]

Coordinates

chr2:-:608586..610283

Molecular Weight (calculated)

34482.2 Da

IEP (calculated)

5.283

GRAVY (calculated)

-0.352

Length

307 amino acids

Sequence
(BLAST)

001: MGQKLGVDSR QKIRQVLGSS SKVQKHDVES IGGGGGEIVP GHSPFDDLPE DCISNIISFT SPRDVCVSAS VSKSFAHAVQ CDSIWEKFLP SEYESLIPPW
101: RVFSSKKDLY FTLCYDPVLV EDGKKSFWLE TASGKKCVLL AAKELWITGG NNPEYWQWIE LCESSFEKVP ELLNNRSFQM GGSMSTQILS LGTHYSVYIV
201: YKIKDERHGL RDLPIQVGVG FKGQEMPKQF ICFDESTDKT KEWPKKKLMK SKKRGDGWME AEIGDFFNDG GLMGFDEVEV SIVDVTSPNL KCGVMIEGIE
301: FRPKDCQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.