Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09383 | Canola | cytosol | 61.31 | 67.76 |
| CDY15823 | Canola | cytosol | 66.67 | 67.47 |
| Bra026609.1-P | Field mustard | cytosol | 66.07 | 66.47 |
| CDY17602 | Canola | cytosol | 60.12 | 64.74 |
| Bra024825.1-P | Field mustard | cytosol | 55.06 | 64.46 |
| CDY17601 | Canola | cytosol | 56.55 | 64.41 |
| CDY17605 | Canola | cytosol | 56.25 | 64.29 |
| Bra024827.1-P | Field mustard | cytosol | 58.63 | 62.74 |
| CDY03060 | Canola | cytosol | 60.12 | 62.73 |
| CDY03062 | Canola | cytosol | 58.93 | 62.07 |
| CDY03059 | Canola | cytosol | 58.93 | 59.46 |
| Bra024824.1-P | Field mustard | cytosol | 59.52 | 59.35 |
| AT2G02360.1 | Thale cress | nucleus | 41.67 | 51.47 |
| AT2G02240.1 | Thale cress | cytosol | 44.64 | 46.88 |
| AT2G02250.1 | Thale cress | cytosol | 43.15 | 46.77 |
| VIT_00s0214g00130.t01 | Wine grape | cytosol | 36.61 | 44.4 |
| AT5G24560.1 | Thale cress | cytosol | 25.6 | 44.1 |
| Solyc05g055870.2.1 | Tomato | cytosol | 40.18 | 43.83 |
| AT2G02310.1 | Thale cress | cytosol | 39.29 | 43.0 |
| AT2G02350.2 | Thale cress | cytosol, mitochondrion | 37.2 | 42.52 |
| VIT_00s0214g00150.t01 | Wine grape | cytosol | 38.69 | 42.48 |
| PGSC0003DMT400031292 | Potato | cytosol | 37.5 | 42.42 |
| Solyc04g050990.2.1 | Tomato | cytosol | 37.5 | 42.42 |
| AT2G02340.1 | Thale cress | cytosol | 38.39 | 42.3 |
| AT1G80110.1 | Thale cress | cytosol | 32.14 | 42.02 |
| AT2G02300.1 | Thale cress | cytosol | 35.42 | 41.9 |
| PGSC0003DMT400060018 | Potato | cytosol | 38.99 | 41.85 |
| KRG92586 | Soybean | cytosol, plastid | 37.5 | 41.58 |
| AT2G02320.1 | Thale cress | mitochondrion | 37.2 | 40.72 |
| KRH68844 | Soybean | cytosol | 38.39 | 40.69 |
| VIT_00s0214g00060.t01 | Wine grape | cytosol | 33.93 | 39.72 |
| VIT_00s0214g00040.t01 | Wine grape | cytosol, plastid | 39.58 | 38.11 |
| VIT_00s0214g00090.t01 | Wine grape | cytosol | 36.61 | 36.5 |
| AT1G56250.1 | Thale cress | cytosol | 30.06 | 35.82 |
| AT1G56240.1 | Thale cress | cytosol | 30.06 | 35.56 |
| AT1G09155.1 | Thale cress | cytosol | 28.87 | 33.56 |
| AT3G53000.1 | Thale cress | cytosol | 22.62 | 25.33 |
| AT5G52120.1 | Thale cress | cytosol | 20.83 | 24.05 |
| AT1G63090.1 | Thale cress | cytosol | 19.64 | 22.84 |
| AT3G61060.2 | Thale cress | cytosol | 19.05 | 21.99 |
| AT1G12710.2 | Thale cress | cytosol | 18.15 | 18.32 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | EntrezGene:814754 | UniProt:A0A178VT42 | ProteinID:AAC78508.1 | ProteinID:AEC05559.1 |
| EMBL:AK229118 | ArrayExpress:AT2G02230 | EnsemblPlantsGene:AT2G02230 | RefSeq:AT2G02230 | TAIR:AT2G02230 | RefSeq:AT2G02230-TAIR-G |
| EnsemblPlants:AT2G02230.1 | TAIR:AT2G02230.1 | Symbol:AtPP2-B1 | EMBL:BT010729 | EMBL:BT020602 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR001810 | RefSeq:NP_178331.2 | ProteinID:OAP09620.1 |
| PFAM:PF00646 | PFAM:PF14299 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2-like |
| PFscan:PS50181 | PANTHER:PTHR32278 | PANTHER:PTHR32278:SF6 | UniProt:Q6NPT8 | SUPFAM:SSF81383 | UniParc:UPI000022005C |
| SEG:seg | : | : | : | : | : |
Description
PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
Coordinates
chr2:-:589945..591689
Molecular Weight (calculated)
37131.7 Da
IEP (calculated)
5.783
GRAVY (calculated)
-0.385
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.