Factsheet for Bra026609.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003735.1-P
Bra008231.1-P
Bra015801.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G02230.1	Bra003735.1-P	AT1G75950.1	12795696
AT2G02230.1	Bra008231.1-P	AT1G75950.1	12795696
AT2G02230.1	Bra015801.1-P	AT1G75950.1	12795696

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09383	Canola	cytosol	91.02	100.0
Bra024825.1-P	Field mustard	cytosol	61.68	71.78
Bra024827.1-P	Field mustard	cytosol	65.57	69.75
AT2G02230.1	Thale cress	cytosol	66.47	66.07
Bra024824.1-P	Field mustard	cytosol	65.27	64.69
Bra024822.1-P	Field mustard	cytosol	34.13	52.29
Bra024823.1-P	Field mustard	cytosol	43.11	50.35
Bra026608.1-P	Field mustard	cytosol	40.12	48.2
Bra026603.1-P	Field mustard	cytosol	41.02	47.08
Solyc04g050990.2.1	Tomato	cytosol	39.52	44.44
PGSC0003DMT400031292	Potato	cytosol	39.52	44.44
Solyc05g055870.2.1	Tomato	cytosol	40.42	43.83
KRG92586	Soybean	cytosol, plastid	39.52	43.56
VIT_00s0214g00130.t01	Wine grape	cytosol	35.33	42.6
PGSC0003DMT400060018	Potato	cytosol	39.82	42.49
Bra026604.1-P	Field mustard	cytosol	40.72	42.24
KRH68844	Soybean	cytosol	39.82	41.96
Bra035198.1-P	Field mustard	cytosol	32.04	41.8
VIT_00s0214g00150.t01	Wine grape	cytosol	38.02	41.5
Bra026605.1-P	Field mustard	cytosol	32.04	41.0
VIT_00s0214g00060.t01	Wine grape	cytosol	34.13	39.72
Bra026606.1-P	Field mustard	plasma membrane, vacuole	40.12	38.4
Bra018579.1-P	Field mustard	cytosol	30.54	36.69
Bra030758.1-P	Field mustard	cytosol	29.64	36.4
VIT_00s0214g00090.t01	Wine grape	cytosol	36.53	36.2
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	37.72	36.1
Bra038174.1-P	Field mustard	cytosol	28.74	33.92
Bra006966.1-P	Field mustard	cytosol	22.75	25.25
Bra014456.1-P	Field mustard	cytosol	21.26	24.83
Bra029137.1-P	Field mustard	cytosol	21.26	24.48
Bra023077.1-P	Field mustard	cytosol	20.66	23.47
Bra027000.1-P	Field mustard	cytosol	20.36	23.45
Bra019781.1-P	Field mustard	cytosol	19.76	23.0
Bra027618.1-P	Field mustard	cytosol	19.76	22.76

Protein Annotations

EnsemblPlants:Bra026609.1	EnsemblPlants:Bra026609.1-P	EnsemblPlantsGene:Bra026609	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:PP2-like	PANTHER:PTHR32278	PANTHER:PTHR32278:SF6
PFAM:PF00646	PFAM:PF14299	PFscan:PS50181	SEG:seg	SUPFAM:SSF81383	UniParc:UPI00025468CA
UniProt:M4ECU9	MapMan:35.1	:	:	:	:

Description

AT2G02230 (E=4e-106) AtPP2-B1 | AtPP2-B1 (Phloem protein 2-B1); carbohydrate binding

Coordinates

chrA02:+:20630354..20631497

Molecular Weight (calculated)

37356.3 Da

IEP (calculated)

5.219

GRAVY (calculated)

-0.376

Length

334 amino acids

Sequence
(BLAST)

001: MEQIQVGDSK CGGGISRNGA VVSVGAATSR FDTLPEDCIS MVIFHTTPRD ACVVASVSRT VKSAAESDLV WEKFLPPEYS SLALPPSLDC SSKKKIYLSL
101: ADDPVLIDEG KKSFWLEKST GKKCYMLSAM DLKITWSDSP AYWQWVTVPE SKFEKVAELC NVCWFEIRGK ISVKMLSKGT HYSVYLVFKR ASSRSYGFDH
201: TPIETEVGFA GKEVRKTFVF LEPSDTDPRS GYGYSGVSLA AVSRAFRTRR PWMRFPREEV EGERESGGNV EEPKERGDKW SEVKLGSFYI DDGGCEDGDE
301: VEVAIMETRM GQWKSGLVFQ GIEIRPVKEE EVTK

Best Arabidopsis Sequence Match ( AT2G02230.1 )
(BLAST)

001: MEQIHGGDSN SGGGGGGSSR NDEISVTRAS RFDALPEDCI SKVISHTSPR DACVVASVSK SVKSAAQSDL VWEMFLPSEY SSLVLQSANH LSKKEIFLSL
101: ADNSVLVENG KKSFWVEKAS GKKCYMLSAM ELTIIWGDSP AYWKWITVPE SKFEKVAELR NVCWFEVRGK ISCGMLSKGT HYSVYVVFKT ANGRSYGFDL
201: VPVEAGVGFV GKVATKKSVY FESGNADSRS ATSHYSGISY AMVSRAFRMR RPWMQVQREE EEEVEGERER GMNVVGPKER VDGWSEVELG KFYINNGGCG
301: DDGSDEIEIS IMETQNGNWK SGLIIQGIEI RPERSN

Arabidopsis Description

PP2B1F-box protein PP2-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NPT8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.