Factsheet for Bra026606.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09380	Canola	cytosol	85.96	94.64
Bra026608.1-P	Field mustard	cytosol	63.04	79.14
Bra024823.1-P	Field mustard	cytosol	61.32	74.83
CDY65052	Canola	cytosol	84.53	68.29
AT2G02240.1	Thale cress	cytosol	57.88	63.12
Bra024822.1-P	Field mustard	cytosol	36.39	58.26
Bra026604.1-P	Field mustard	cytosol	50.43	54.66
Bra026603.1-P	Field mustard	cytosol	40.97	49.14
Bra026605.1-P	Field mustard	cytosol	36.39	48.66
Bra024827.1-P	Field mustard	cytosol	39.54	43.95
Bra024825.1-P	Field mustard	cytosol	35.82	43.55
VIT_00s0214g00130.t01	Wine grape	cytosol	32.66	41.16
Solyc04g050990.2.1	Tomato	cytosol	34.38	40.4
Bra026609.1-P	Field mustard	cytosol	38.4	40.12
Bra024824.1-P	Field mustard	cytosol	38.68	40.06
PGSC0003DMT400031292	Potato	cytosol	33.81	39.73
VIT_00s0214g00060.t01	Wine grape	cytosol	32.38	39.37
Bra035198.1-P	Field mustard	cytosol	28.65	39.06
KRG92586	Soybean	cytosol, plastid	32.66	37.62
Solyc05g055870.2.1	Tomato	cytosol	32.95	37.34
Bra018579.1-P	Field mustard	cytosol	29.23	36.69
PGSC0003DMT400060018	Potato	cytosol	32.38	36.1
KRH68844	Soybean	cytosol	32.38	35.65
VIT_00s0214g00150.t01	Wine grape	cytosol	31.23	35.62
Bra030758.1-P	Field mustard	cytosol	26.93	34.56
VIT_00s0214g00040.t01	Wine grape	cytosol, plastid	33.81	33.81
VIT_00s0214g00090.t01	Wine grape	cytosol	31.81	32.94
Bra038174.1-P	Field mustard	cytosol	26.36	32.51
Bra029137.1-P	Field mustard	cytosol	21.78	26.21
Bra027000.1-P	Field mustard	cytosol	20.92	25.17
Bra014456.1-P	Field mustard	cytosol	20.34	24.83
Bra006966.1-P	Field mustard	cytosol	21.2	24.58
Bra023077.1-P	Field mustard	cytosol	20.63	24.49
Bra019781.1-P	Field mustard	cytosol	19.77	24.04
Bra027618.1-P	Field mustard	cytosol	19.48	23.45

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	EnsemblPlantsGene:Bra026606	EnsemblPlants:Bra026606.1	EnsemblPlants:Bra026606.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	UniProt:M4ECU6
PFAM:PF00646	PFAM:PF14299	InterPro:PP2-like	PFscan:PS50181	PANTHER:PTHR32278	PANTHER:PTHR32278:SF6
SMART:SM00256	SUPFAM:SSF81383	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025468C7	SEG:seg

Description

AT2G02240 (E=3e-102) MEE66 | MEE66 (maternal effect embryo arrest 66)

Coordinates

chrA02:+:20598662..20601943

Molecular Weight (calculated)

39736.5 Da

IEP (calculated)

7.874

GRAVY (calculated)

-0.276

Length

349 amino acids

Sequence
(BLAST)

001: MYFQRNVLFF AFCFAPLVST TFGSASAVTS GSVREKFLPQ EYSIFSSMKK RFPARCDDYV LIEDRKMIPD AGDLMHATMP SPFDSLPVDC ISTIISFTSP
101: RDACVSASVS KTFESAVKSD TVWEKFLPSE YSSLIPQYSR VFLSKKELYF ALCDDPVLIE DGKKSFWLEK ASGKRCIMLS LKESSITWGT SPQYWRWISI
201: PESRFEKIAE LLNVCWFDIG DGMHTRYLSP RTHYSVYIVF KTKNGCPNLG DSPVDVGVGL VGQEPSQKLI YFIGPPRRGR GRGRRRETET RDVTRPEARE
301: DGWMEAELGE FYNDSCCDDI SFSIIKTNTP HWKSGLIVQG IEFRPAKIR

Best Arabidopsis Sequence Match ( AT2G02250.1 )
(BLAST)

001: MIQSTMGHKQ SVDSRGKGRK VPGSSSMVQK HRVESSGGAI ISGPSLFDNL PEDCISNIIS FTSPRDACVA ASVSKTFESA VNSDSVWDKF LPSDYSSLVP
101: PSRVFSSKKE LYFAICDNPV LVEDGGKSFW LEKENGKKCF MLSPKKSMWI TWVSTPQYWR WISIPEARFE EVPELLNVCW FEVRGGMNTK ELSPGTRYSA
201: YIVFKTKNGC PNLGDVPVEA TVGLVGQESS QRHIYFVGPS DQRRDRETRD VTRPTKRKDG WMEAELGQFF NESGCDVVDT SILEIKTPYW KRGLIIQGIE
301: FRPTKSLFYI

Arabidopsis Description

PP2B2Putative F-box protein PP2-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.