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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003735.1-P
Bra008231.1-P
Bra015801.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G63090.1 Bra003735.1-P AT1G75950.1 12795696
AT1G63090.1 Bra008231.1-P AT1G75950.1 12795696
AT1G63090.1 Bra015801.1-P AT1G75950.1 12795696
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY49201 Canola cytosol 100.0 100.0
Bra027000.1-P Field mustard cytosol 90.0 90.0
AT1G63090.1 Thale cress cytosol 82.41 82.7
Bra019781.1-P Field mustard cytosol 72.76 73.52
HORVU1Hr1G048690.1 Barley peroxisome 37.24 63.53
KRH03980 Soybean cytosol, plastid 60.34 61.19
HORVU2Hr1G094960.4 Barley cytosol 40.69 59.6
PGSC0003DMT400058590 Potato plastid 57.59 57.79
Solyc08g080360.2.1 Tomato plastid 57.24 57.44
VIT_02s0025g04380.t01 Wine grape cytosol 60.34 56.63
PGSC0003DMT400010881 Potato plastid 56.21 56.4
Solyc12g056410.1.1 Tomato cytosol, plastid 55.86 56.06
GSMUA_Achr4P27200_001 Banana cytosol 53.79 54.36
HORVU1Hr1G048700.4 Barley cytosol, nucleus, plasma membrane 55.86 53.64
Bra014456.1-P Field mustard cytosol 52.76 53.5
GSMUA_Achr11P... Banana cytosol 52.76 53.5
Os09t0525300-01 Rice cytosol 51.72 53.38
TraesCS1D01G187700.1 Wheat cytosol, plasma membrane 55.17 53.33
TraesCS1B01G196400.1 Wheat cytosol, plasma membrane 54.83 53.0
GSMUA_Achr5P03300_001 Banana cytosol 52.76 52.58
GSMUA_Achr1P03900_001 Banana cytosol 52.76 52.4
TraesCS1A01G188700.1 Wheat plasma membrane 54.83 52.3
KRH57251 Soybean plastid 61.38 52.2
GSMUA_Achr4P24870_001 Banana cytosol 54.48 52.15
TraesCS2A01G400100.1 Wheat cytosol 53.45 52.01
TraesCS2D01G397700.1 Wheat cytosol 53.45 52.01
Zm00001d029673_P001 Maize plasma membrane 52.76 51.69
Os02t0675800-01 Rice cytosol 52.76 51.52
EER94629 Sorghum plasma membrane 53.1 51.16
Os03t0116700-01 Rice cytosol, extracellular 52.07 50.84
EER99217 Sorghum cytosol 52.41 50.84
TraesCS2B01G418200.2 Wheat cytosol 53.1 50.83
GSMUA_Achr3P12400_001 Banana cytosol 50.0 50.35
GSMUA_Achr7P05860_001 Banana cytosol 50.34 50.34
EER95641 Sorghum cytosol 51.03 50.34
Zm00001d021224_P001 Maize cytosol 51.38 50.34
TraesCS5A01G312700.1 Wheat cytosol 49.66 50.17
Os04t0571300-01 Rice cytosol, mitochondrion, peroxisome 52.41 50.0
TraesCS6A01G256100.1 Wheat cytosol 51.38 50.0
TraesCS5B01G313700.1 Wheat cytosol 49.66 50.0
Zm00001d027361_P001 Maize cytosol 51.38 50.0
TraesCS6B01G269300.1 Wheat cytosol 51.38 50.0
TraesCS6D01G237300.1 Wheat cytosol 51.38 50.0
TraesCS5D01G319500.1 Wheat cytosol 48.97 49.48
HORVU5Hr1G080530.1 Barley cytosol 48.97 49.48
KXG31015 Sorghum cytosol 51.03 49.17
TraesCS4B01G356300.1 Wheat cytosol 51.03 48.21
Zm00001d051447_P002 Maize cytosol 48.97 47.97
EES11284 Sorghum cytosol 51.72 47.92
TraesCS5A01G525700.1 Wheat cytosol 50.34 47.71
TraesCS4D01G350000.1 Wheat cytosol 50.34 47.56
Bra006966.1-P Field mustard cytosol 48.97 47.18
GSMUA_Achr11P... Banana cytosol 29.31 46.96
Bra023077.1-P Field mustard cytosol 47.24 46.6
Bra029137.1-P Field mustard cytosol 46.21 46.21
Zm00001d026078_P001 Maize cytosol 44.14 44.29
Os10t0522400-01 Rice cytosol 23.45 41.21
Zm00001d024256_P001 Maize cytosol, mitochondrion 34.83 40.56
HORVU4Hr1G086110.1 Barley cytosol 21.03 40.13
Zm00001d035636_P001 Maize plastid 33.45 37.16
Os02t0224900-01 Rice endoplasmic reticulum, extracellular 28.97 35.44
Zm00001d021854_P001 Maize cytosol 10.69 35.23
HORVU5Hr1G055050.1 Barley mitochondrion 18.62 31.76
HORVU2Hr1G049730.1 Barley cytosol 18.28 31.18
Bra024822.1-P Field mustard cytosol 20.0 26.61
Bra030758.1-P Field mustard cytosol 23.1 24.63
Bra018579.1-P Field mustard cytosol 23.1 24.1
Bra026608.1-P Field mustard cytosol 22.76 23.74
Bra024823.1-P Field mustard cytosol 22.76 23.08
Bra035198.1-P Field mustard cytosol 20.34 23.05
Bra024827.1-P Field mustard cytosol 24.83 22.93
Bra026604.1-P Field mustard cytosol 24.83 22.36
Bra038174.1-P Field mustard cytosol 21.72 22.26
Bra026603.1-P Field mustard cytosol 21.38 21.31
Bra026605.1-P Field mustard cytosol 18.62 20.69
Bra024824.1-P Field mustard cytosol 23.79 20.47
Bra024825.1-P Field mustard cytosol 19.66 19.86
Bra026609.1-P Field mustard cytosol 22.76 19.76
Bra026606.1-P Field mustard plasma membrane, vacuole 23.45 19.48
Protein Annotations
EnsemblPlants:Bra027618.1EnsemblPlants:Bra027618.1-PEnsemblPlantsGene:Bra027618Gene3D:1.20.1280.50GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810InterPro:PP2-likePANTHER:PTHR31960
PANTHER:PTHR31960:SF2PFAM:PF00646PFAM:PF14299PFscan:PS50181SEG:segSMART:SM00256
SUPFAM:SSF81383UniParc:UPI000254248FUniProt:M4EFQ5MapMan:19.2.2.8.1.4.6::
Description
AT1G63090 (E=4e-134) AtPP2-A11 | AtPP2-A11 (Phloem protein 2-A11); carbohydrate binding
Coordinates
chrA09:+:7339540..7340605
Molecular Weight (calculated)
32867.9 Da
IEP (calculated)
8.887
GRAVY (calculated)
-0.395
Length
290 amino acids
Sequence
(BLAST)
001: MGSGFSLFTN GSSSSSSRER DLLTPGLGDL PESCVASILE NLDPVEICRF SKLNRAFHSA SWADVVWESK LPQDYRLILE KIIGGFPEKL RKRDIYNFLS
101: RVNSFDQGTK KAWVDKRTSD LCLYISAKGL SITGIDDRRY WNQIPSDESR FGSVAYLQQI WWFQVDGEID FPFPAGTYSV FFRLHLGKPG KRFGWKVCNT
201: EQIHGWNIKP ARFQIWTEDG QHSSSQCMLT GSGSWNHYHA GDFVVGKSKS SSTKLKFSMT QIDCTHTKGG LCVDSVIVYP SSCKDRLRRV
Best Arabidopsis Sequence Match ( AT1G63090.1 )
(BLAST)
001: MGSGFSLFQK NLSSCYGDRD LLQPGLGDLP ESCVALILQN LDPVEICRFS KLNTAFHGAS WADFVWESKL PPDYKLILEK ILGSFPDNLR KRDIFTFLSR
101: VNSFDEGNKK AWVDKRTGGL CLCTSAKGLS ITGIDDRRYW SHIPSDDSRF ASVAYVQQIW WFQVDGEIDF PFPAGTYSVY FRLQLGKPGK RFGWKVVDTE
201: QVHGWNIKPV RFQLSTEDGQ HSSSQCMLTE AGNWSHYHAG DFVVGKSKSS STKIKFSMTQ IDCTHTKGGL CVDSVVVYPS SCKDRLMQI
Arabidopsis Description
PP2A11F-box protein PP2-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.